c20579fc7c537c1736650125c5d264357d2cfa78 angie Mon Sep 18 13:15:16 2017 -0700 Big search & replace: use https instead of http for NCBI URLs. refs #17793 diff --git src/hg/js/hgTracks.js src/hg/js/hgTracks.js index 37c54cb..273466b 100644 --- src/hg/js/hgTracks.js +++ src/hg/js/hgTracks.js @@ -302,31 +302,31 @@ var newSize = genomePos.disguiseSize(position); //warn("genomePos.set() position = "+position+", newSize = "+newSize); if (newSize > 0) size = newSize; } $('#size').text(commify(size)); // add commas } if (pos) { // fixup external static links on page' // Example ensembl link: // http://www.ensembl.org/Homo_sapiens/contigview?chr=21&start=33031934&end=33041241 genomePos.linkFixup(pos, "ensemblLink", new RegExp("(.+start=)[0-9]+"), "end"); // Example NCBI link: - // http://www.ncbi.nlm.nih.gov/mapview/maps.cgi?taxid=9606&CHR=21&BEG=33031934&END=33041241 + // https://www.ncbi.nlm.nih.gov/mapview/maps.cgi?taxid=9606&CHR=21&BEG=33031934&END=33041241 genomePos.linkFixup(pos, "ncbiLink", new RegExp("(.+BEG=)[0-9]+"), "END"); // Example medaka link: // http://utgenome.org/medakabrowser_ens_jump.php?revision=version1.0&chr=chromosome18&start=14435198&end=14444829 genomePos.linkFixup(pos, "medakaLink", new RegExp("(.+start=)[0-9]+"), "end"); var link; var reg; var a; if ($('#wormbaseLink').length) { // e.g. http://www.wormbase.org/db/gb2/gbrowse/c_elegans?name=II:14646301-14667800 link = $('#wormbaseLink').attr('href'); reg = new RegExp("(.+:)[0-9]+"); a = reg.exec(link); if (a && a[1]) {