Commits for cath

v355_base to v356_preview (2017-09-18 to 2017-09-25) v356

76cf515573b91bc982e10fa3c12f0a4bb42326b1 Wed Sep 20 12:25:15 2017 -0700

• ce4: Repairing conservation tracks, refs #17373
  • src/hg/makeDb/trackDb/worm/ce4/trackDb.5way.ra - lines changed 80, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/worm/ce4/trackDb.ra - lines changed 68, context: html, text, full: html, text

6f7236e5cf5950d5c3b0d653293619e63767a8d2 Wed Sep 20 13:42:18 2017 -0700

• ce4: Minor fix: Pointing to ce4 for codon species, refs #17373
  • src/hg/makeDb/trackDb/worm/ce4/trackDb.5way.ra - lines changed 1, context: html, text, full: html, text

334bbbe212bfc41e0ec69ba92d3186397c83d31e Wed Sep 20 13:55:46 2017 -0700

• bosTau4: Repairing conservation tracks, refs #17373
  • src/hg/makeDb/trackDb/cow/bosTau4/trackDb.5way.ra - lines changed 87, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/cow/bosTau4/trackDb.ra - lines changed 37, context: html, text, full: html, text

a5fa2e93a4f2930378325c8560c562836a2cd626 Wed Sep 20 14:16:54 2017 -0700

• braFlo1: Repairing conservation tracks, refs #17373
  • src/hg/makeDb/trackDb/lancelet/braFlo1/trackDb.5way.ra - lines changed 88, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/lancelet/braFlo1/trackDb.ra - lines changed 39, context: html, text, full: html, text

e40fe05c179fe084678b6f0425bebd93ffe34a51 Wed Sep 20 15:05:38 2017 -0700

• ce4: Minor fix: changing speciesGroup to nematode, refs #17373
  • src/hg/makeDb/trackDb/worm/ce4/trackDb.5way.ra - lines changed 2, context: html, text, full: html, text

d2a49894c7d0fdfcdb2a45fff1fe75a26a67eefd Wed Sep 20 15:26:01 2017 -0700

• calJac1: Repairing conservation tracks, refs #17373
  • src/hg/makeDb/trackDb/marmoset/calJac1/trackDb.9way.ra - lines changed 89, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/marmoset/calJac1/trackDb.ra - lines changed 39, context: html, text, full: html, text

be9ecbfd55af72112e78230f46537a3ef60f13bf Wed Sep 20 16:09:10 2017 -0700

• canFam2: Repairing conservation tracks, refs #17373
  • src/hg/makeDb/trackDb/dog/canFam2/trackDb.4way.ra - lines changed 88, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/dog/canFam2/trackDb.ra - lines changed 27, context: html, text, full: html, text

1beba61475ee887acd97a7d60e8ad795fa69a397 Wed Sep 20 16:20:10 2017 -0700

• calJac1: Minor fix: updating clade, refs #17373
  • src/hg/makeDb/trackDb/marmoset/calJac1/trackDb.9way.ra - lines changed 7, context: html, text, full: html, text

8b9d96cb76f088ec03f766cfac60cffc93929a6b Wed Sep 20 16:32:55 2017 -0700

• bosTau4: Minor fix: updating clade, refs #17373
  • src/hg/makeDb/trackDb/cow/bosTau4/trackDb.5way.ra - lines changed 7, context: html, text, full: html, text

3b7edd2727653b74099b9e9a5a0c486427d2970d Wed Sep 20 17:05:23 2017 -0700

• braFlo1: Minor fix: updating clade for species selection categories, refs #17373
  • src/hg/makeDb/trackDb/lancelet/braFlo1/trackDb.5way.ra - lines changed 4, context: html, text, full: html, text

c26fe270bf65689576d1cdefd6bd6c9f9e56ae9e Wed Sep 20 18:00:52 2017 -0700

• danRer3: Repairing conservation tracks, refs #17373
  • src/hg/makeDb/trackDb/zebrafish/danRer3/trackDb.5way.ra - lines changed 89, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/zebrafish/danRer3/trackDb.ra - lines changed 23, context: html, text, full: html, text

04933b3d4e3e04c8ff8617bbf41f6750fbf15787 Wed Sep 20 18:06:33 2017 -0700

• braFlo1: Minor spelling fix, refs #17373
  • src/hg/makeDb/trackDb/lancelet/braFlo1/trackDb.5way.ra - lines changed 4, context: html, text, full: html, text

06e04fc757f2fb0f18c28ea0edffdb940aafa9e9 Wed Sep 20 18:53:27 2017 -0700

• danRer4: Repairing conservation tracks, refs #17373
  • src/hg/makeDb/trackDb/zebrafish/danRer4/trackDb.7way.ra - lines changed 90, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/zebrafish/danRer4/trackDb.ra - lines changed 26, context: html, text, full: html, text

42853701e331867eb5fabbaa41d01d7fff5b978c Wed Sep 20 19:39:52 2017 -0700

• dm2: Repairing conservation tracks, refs #17373
  • src/hg/makeDb/trackDb/drosophila/dm2/trackDb.15way.ra - lines changed 80, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/drosophila/dm2/trackDb.9way.ra - lines changed 81, context: html, text, full: html, text

be53406e6e0d6e3d6042f8b6e5fc8bcba6386271 Thu Sep 21 06:36:12 2017 -0700

• Adding a few field labels, ok by Hiram, refs #17373
  • src/hg/makeDb/trackDb/tagTypes.tab - lines changed 56, context: html, text, full: html, text

368bc2310312e61d3377ce19d796b2521842240a Thu Sep 21 09:43:26 2017 -0700

• dm3: Repairing conservation tracks, refs #17373
  • src/hg/makeDb/trackDb/drosophila/dm3/trackDb.15way.ra - lines changed 80, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/drosophila/dm3/trackDb.ra - lines changed 31, context: html, text, full: html, text

38c0abb824ad75cf06f26a8f928336e3b4baae40 Thu Sep 21 09:47:24 2017 -0700

• dm2: Minor fix: updating clade, removing 15way from trackDb, refs #17373
  • src/hg/makeDb/trackDb/drosophila/dm2/trackDb.15way.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/drosophila/dm2/trackDb.ra - lines changed 56, context: html, text, full: html, text

f80086702d8ce3aa0a06fa12cb8f5c66d3b2bc67 Thu Sep 21 10:21:08 2017 -0700

• braFlo1: Minor clade fix, refs #17373
  • src/hg/makeDb/trackDb/lancelet/braFlo1/trackDb.5way.ra - lines changed 5, context: html, text, full: html, text

de16bacf6fba7e2090170d44ffbafea93a237ceb Thu Sep 21 10:54:16 2017 -0700

• equCab2: Repairing conservation tracks, refs #17373
  • src/hg/makeDb/trackDb/horse/equCab2/trackDb.6way.ra - lines changed 82, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/horse/equCab2/trackDb.ra - lines changed 36, context: html, text, full: html, text

0fc775272526a1c765235cf6865f82463a5e2099 Thu Sep 21 11:17:15 2017 -0700

• felCat3: Repairing conservation tracks, refs #17373
  • src/hg/makeDb/trackDb/cat/felCat3/trackDb.4way.ra - lines changed 81, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/cat/felCat3/trackDb.ra - lines changed 35, context: html, text, full: html, text

a0579875da086180c784eeef47d4e3858dd8b957 Thu Sep 21 11:48:19 2017 -0700

• felCat3: Repairing conservation tracks, refs #17373
  • src/hg/makeDb/trackDb/fugu/fr2/trackDb.5way.ra - lines changed 88, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/fugu/fr2/trackDb.ra - lines changed 35, context: html, text, full: html, text

7b6b4eae405ae71343ab1f86a89a85d84085fdfd Thu Sep 21 16:26:28 2017 -0700

• galGal2: Repairing conservation tracks, refs #17373
  • src/hg/makeDb/trackDb/chicken/galGal2/trackDb.7way.ra - lines changed 89, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/chicken/galGal2/trackDb.ra - lines changed 27, context: html, text, full: html, text

61f47ddb0117a419af8d1d9c483c98eadaff8867 Thu Sep 21 16:35:08 2017 -0700

• galGal2: Minor fix: Adding detailed long label, refs #17373
  • src/hg/makeDb/trackDb/chicken/galGal2/trackDb.7way.ra - lines changed 1, context: html, text, full: html, text

0d8a1e4cb9dc4d2bd2ebcf710ad1abe6d0556bd5 Fri Sep 22 08:56:02 2017 -0700

• Putting sGroup_Placental_Mammal back in place, ro RM
  • src/hg/makeDb/trackDb/tagTypes.tab - lines changed 1, context: html, text, full: html, text

f0ca5e500e79bb6cf1f151d3339d289a3405babd Fri Sep 22 09:52:24 2017 -0700

• Cleaning a mistake, adding missing sGroups back in, no RM
  • src/hg/makeDb/trackDb/tagTypes.tab - lines changed 17, context: html, text, full: html, text

aec51edfda529d62fe55490aee7308dc90ddbb84 Fri Sep 22 11:07:23 2017 -0700

• minor typo fixed, refs 17373
  • src/hg/makeDb/trackDb/tagTypes.tab - lines changed 1, context: html, text, full: html, text

821baa07bf06084bcd41d7340ffc18ccb5fe310a Fri Sep 22 13:52:45 2017 -0700

• galGal3: Repairing conservation tracks, refs #17373
  • src/hg/makeDb/trackDb/chicken/galGal3/trackDb.7way.ra - lines changed 81, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/chicken/galGal3/trackDb.ra - lines changed 33, context: html, text, full: html, text

e25d425d0f05be8bc20f6def9fce1300199b3915 Fri Sep 22 14:17:52 2017 -0700

• gasAcu1: Repairing conservation tracks, refs #17373
  • src/hg/makeDb/trackDb/stickleback/gasAcu1/trackDb.8way.ra - lines changed 83, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/stickleback/gasAcu1/trackDb.ra - lines changed 35, context: html, text, full: html, text

19269b4cea95e5a9ec59d7c5d010a53224cf4705 Fri Sep 22 15:07:49 2017 -0700

• hg16: Repairing conservation tracks, refs #17373
  • src/hg/makeDb/trackDb/human/hg16/trackDb.5way.ra - lines changed 80, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/trackDb.ra - lines changed 26, context: html, text, full: html, text

69becaf6433a1d5ef10501cb78668701098f2f8b Fri Sep 22 15:36:57 2017 -0700

• hg16: Making Conservation track appear first in group, no RM
  • src/hg/makeDb/trackDb/human/hg16/trackDb.5way.ra - lines changed 2, context: html, text, full: html, text

1285e6d9c411e21481c25d76759aad9ed41479e8 Fri Sep 22 16:33:40 2017 -0700

• hg17: Repairing conservation tracks, refs #17373
  • src/hg/makeDb/trackDb/human/hg17/trackDb.17way.ra - lines changed 84, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg17/trackDb.ra - lines changed 99, context: html, text, full: html, text

347de2baa99910f7c979cdd520d8adb37a6b4c1f Fri Sep 22 16:58:31 2017 -0700

• Fixing priority for Conservation track, no RM
  • src/hg/makeDb/trackDb/human/hg17/trackDb.17way.ra - lines changed 1, context: html, text, full: html, text

0aa57fa07e7eb670c1062b87c9281a5edb117b12 Fri Sep 22 17:00:08 2017 -0700

• mm7: Repairing conservation tracks, refs #17373
  • src/hg/makeDb/trackDb/mouse/mm7/trackDb.17way.ra - lines changed 82, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm7/trackDb.ra - lines changed 48, context: html, text, full: html, text

8038170f3548e0ec4baa0ee2de40c84e6b89a61a Sat Sep 23 07:41:40 2017 -0700

• mm8: Repairing conservation tracks, refs #17373
  • src/hg/makeDb/trackDb/mouse/mm8/trackDb.17way.ra - lines changed 83, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm8/trackDb.ra - lines changed 28, context: html, text, full: html, text

ee1808777c64a60c19b8af1351d0516d667b22e7 Sat Sep 23 08:07:31 2017 -0700

• monDom4: Repairing conservation tracks, refs #17373
  • src/hg/makeDb/trackDb/opossum/monDom4/trackDb.7way.ra - lines changed 84, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/opossum/monDom4/trackDb.ra - lines changed 33, context: html, text, full: html, text

55460111ba994b7becb614af528512ce1151e0be Sat Sep 23 08:22:50 2017 -0700

• monDom5: Repairing conservation tracks, refs #17373
  • src/hg/makeDb/trackDb/opossum/monDom5/trackDb.9way.ra - lines changed 91, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/opossum/monDom5/trackDb.ra - lines changed 35, context: html, text, full: html, text