File Changes for angie

v358_base to v359_preview (2017-11-27 to 2017-12-04) v359

• src/hg/lib/refSeqFuncElems.as
  • lines changed 6, context: html, text, full: html, text
    3ab97c0ed056b21d4c061f9cb0055f30391758ee Wed Nov 29 14:07:07 2017 -0800
    Updated refSeqFuncElems track to use NCBI's coloring and labeling scheme; also scrape PMIDs from note and function attributes. refs #19638
  • lines changed 1, context: html, text, full: html, text
    e41e01c3bbfda0c94e7a3b9509463bae02500a4a Wed Nov 29 14:35:01 2017 -0800
    Clarification for geneIds column description.
• src/hg/makeDb/doc/hg38/hg38.txt
  • lines changed 41, context: html, text, full: html, text
    3ab97c0ed056b21d4c061f9cb0055f30391758ee Wed Nov 29 14:07:07 2017 -0800
    Updated refSeqFuncElems track to use NCBI's coloring and labeling scheme; also scrape PMIDs from note and function attributes. refs #19638
• src/hg/makeDb/doc/mm10.txt
  • lines changed 39, context: html, text, full: html, text
    3ec2248dca789bbbc6b602168c507263a141a0ef Wed Nov 29 14:33:43 2017 -0800
    Updated mm10 refSeqFuncElems track. refs #19638
• src/hg/makeDb/trackDb/refSeqFuncElems.html
  • lines changed 14, context: html, text, full: html, text
    36ccf9dfc32490e099b5686c9a4823cb4d77b9cc Wed Nov 29 15:39:19 2017 -0800
    Added description of NCBI color scheme. refs #19638
• src/hg/makeDb/trackDb/trackDb.ra
  • lines changed 7, context: html, text, full: html, text
    3ab97c0ed056b21d4c061f9cb0055f30391758ee Wed Nov 29 14:07:07 2017 -0800
    Updated refSeqFuncElems track to use NCBI's coloring and labeling scheme; also scrape PMIDs from note and function attributes. refs #19638
• src/hg/utils/automation/parseRefSeqFuncElems
  • lines changed 160, context: html, text, full: html, text
    3ab97c0ed056b21d4c061f9cb0055f30391758ee Wed Nov 29 14:07:07 2017 -0800
    Updated refSeqFuncElems track to use NCBI's coloring and labeling scheme; also scrape PMIDs from note and function attributes. refs #19638
  • lines changed 3, context: html, text, full: html, text
    03286893debda8e2edc28a7dde6302cf333ca465 Wed Nov 29 15:38:45 2017 -0800
    parseRefSeqFuncElems: sometimes there is no feat_class and no note for sequence features; use standard_name if present.