File Changes for angie

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v359_base to v360_preview (2017-12-18 to 2018-01-08) v360

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src/hg/hgTracks/extTools.c
- lines changed 15, context: html, text, full: html, text
  d3c4dd4f1df4b3919520794bfcaac0a7d0935a7f Tue Dec 19 12:07:23 2017 -0800
  Replace hgTracks' links to NCBI's obsolete Map Viewer with the new & improved Genome Data Viewer. GDV has only the latest RefSeq assembly for all species except human; it wants GCF_... IDs, which we will have to keep updating in hdb.c. It's possible that someday NCBI may accept our db IDs instead of GCF_. refs #18671
src/hg/hgTracks/extTools.ra
- lines changed 23, context: html, text, full: html, text
  d3c4dd4f1df4b3919520794bfcaac0a7d0935a7f Tue Dec 19 12:07:23 2017 -0800
  Replace hgTracks' links to NCBI's obsolete Map Viewer with the new & improved Genome Data Viewer. GDV has only the latest RefSeq assembly for all species except human; it wants GCF_... IDs, which we will have to keep updating in hdb.c. It's possible that someday NCBI may accept our db IDs instead of GCF_. refs #18671
src/hg/hgTracks/menu.c
- lines changed 58, context: html, text, full: html, text
  d3c4dd4f1df4b3919520794bfcaac0a7d0935a7f Tue Dec 19 12:07:23 2017 -0800
  Replace hgTracks' links to NCBI's obsolete Map Viewer with the new & improved Genome Data Viewer. GDV has only the latest RefSeq assembly for all species except human; it wants GCF_... IDs, which we will have to keep updating in hdb.c. It's possible that someday NCBI may accept our db IDs instead of GCF_. refs #18671
src/hg/htdocs/goldenPath/help/hgTracksHelp.html
- lines changed 1, context: html, text, full: html, text
  07334064a7acc319895a676e5ba3a6e2e6efbd5e Tue Dec 19 13:27:09 2017 -0800
  Updating NCBI Map Viewer link to Genome Data Viewer. refs #18671
src/hg/htdocs/goldenPath/newsarch.html
- lines changed 2, context: html, text, full: html, text
  44515905fdb7ae6baecf321b2d86139d0d5fa1f2 Tue Dec 19 13:26:20 2017 -0800
  Updating NCBI assembly statistics links from old mapview/stats/BuildStats.cgi to the current style of assembly pages, where possible. For some very old mouse assemblies, NCBI does not have assembly pages. I will leave those links alone so they'll work until NCBI really drops mapview/stats/BuildStats.cgi. refs #18671.
src/hg/inc/hdb.h
- lines changed 3, context: html, text, full: html, text
  d3c4dd4f1df4b3919520794bfcaac0a7d0935a7f Tue Dec 19 12:07:23 2017 -0800
  Replace hgTracks' links to NCBI's obsolete Map Viewer with the new & improved Genome Data Viewer. GDV has only the latest RefSeq assembly for all species except human; it wants GCF_... IDs, which we will have to keep updating in hdb.c. It's possible that someday NCBI may accept our db IDs instead of GCF_. refs #18671
src/hg/js/hgTracks.js
- lines changed 5, context: html, text, full: html, text
  d3c4dd4f1df4b3919520794bfcaac0a7d0935a7f Tue Dec 19 12:07:23 2017 -0800
  Replace hgTracks' links to NCBI's obsolete Map Viewer with the new & improved Genome Data Viewer. GDV has only the latest RefSeq assembly for all species except human; it wants GCF_... IDs, which we will have to keep updating in hdb.c. It's possible that someday NCBI may accept our db IDs instead of GCF_. refs #18671
src/hg/lib/hdb.c
- lines changed 39, context: html, text, full: html, text
  d3c4dd4f1df4b3919520794bfcaac0a7d0935a7f Tue Dec 19 12:07:23 2017 -0800
  Replace hgTracks' links to NCBI's obsolete Map Viewer with the new & improved Genome Data Viewer. GDV has only the latest RefSeq assembly for all species except human; it wants GCF_... IDs, which we will have to keep updating in hdb.c. It's possible that someday NCBI may accept our db IDs instead of GCF_. refs #18671
src/hg/makeDb/trackDb/human/hg17/description.html
- lines changed 1, context: html, text, full: html, text
  44515905fdb7ae6baecf321b2d86139d0d5fa1f2 Tue Dec 19 13:26:20 2017 -0800
  Updating NCBI assembly statistics links from old mapview/stats/BuildStats.cgi to the current style of assembly pages, where possible. For some very old mouse assemblies, NCBI does not have assembly pages. I will leave those links alone so they'll work until NCBI really drops mapview/stats/BuildStats.cgi. refs #18671.
src/hg/makeDb/trackDb/human/hg18/description.html
- lines changed 1, context: html, text, full: html, text
  44515905fdb7ae6baecf321b2d86139d0d5fa1f2 Tue Dec 19 13:26:20 2017 -0800
  Updating NCBI assembly statistics links from old mapview/stats/BuildStats.cgi to the current style of assembly pages, where possible. For some very old mouse assemblies, NCBI does not have assembly pages. I will leave those links alone so they'll work until NCBI really drops mapview/stats/BuildStats.cgi. refs #18671.
src/hg/makeDb/trackDb/mouse/mm6/description.html
- lines changed 1, context: html, text, full: html, text
  44515905fdb7ae6baecf321b2d86139d0d5fa1f2 Tue Dec 19 13:26:20 2017 -0800
  Updating NCBI assembly statistics links from old mapview/stats/BuildStats.cgi to the current style of assembly pages, where possible. For some very old mouse assemblies, NCBI does not have assembly pages. I will leave those links alone so they'll work until NCBI really drops mapview/stats/BuildStats.cgi. refs #18671.
src/hg/makeDb/trackDb/mouse/mm7/description.html
- lines changed 1, context: html, text, full: html, text
  44515905fdb7ae6baecf321b2d86139d0d5fa1f2 Tue Dec 19 13:26:20 2017 -0800
  Updating NCBI assembly statistics links from old mapview/stats/BuildStats.cgi to the current style of assembly pages, where possible. For some very old mouse assemblies, NCBI does not have assembly pages. I will leave those links alone so they'll work until NCBI really drops mapview/stats/BuildStats.cgi. refs #18671.
src/hg/makeDb/trackDb/mouse/mm8/description.html
- lines changed 1, context: html, text, full: html, text
  44515905fdb7ae6baecf321b2d86139d0d5fa1f2 Tue Dec 19 13:26:20 2017 -0800
  Updating NCBI assembly statistics links from old mapview/stats/BuildStats.cgi to the current style of assembly pages, where possible. For some very old mouse assemblies, NCBI does not have assembly pages. I will leave those links alone so they'll work until NCBI really drops mapview/stats/BuildStats.cgi. refs #18671.
src/hg/makeDb/trackDb/mouse/mm9/description.html
- lines changed 1, context: html, text, full: html, text
  44515905fdb7ae6baecf321b2d86139d0d5fa1f2 Tue Dec 19 13:26:20 2017 -0800
  Updating NCBI assembly statistics links from old mapview/stats/BuildStats.cgi to the current style of assembly pages, where possible. For some very old mouse assemblies, NCBI does not have assembly pages. I will leave those links alone so they'll work until NCBI really drops mapview/stats/BuildStats.cgi. refs #18671.
src/hg/makeDb/trackDb/oreNil/oreNil2/description.html
- lines changed 1, context: html, text, full: html, text
  d87f9f32733862a6eac1d815f10ca699d134fdba Tue Dec 19 13:20:34 2017 -0800
  Fixing typo in GCA ID.

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