All File Changes

v362_preview2 to v362_base (2018-02-26 to 2018-03-05) v362

• src/browserbox/root/updateBrowser.sh
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    3def22932a178f8211e6fef5e28cf123173e27e1 Fri Mar 2 09:14:59 2018 -0800
    Adding a comment on why we need to check if we can connect to genome-euro
• src/hg/hgCollection/hgCollection.c
  • lines changed 7, context: html, text, full: html, text
    f01fbeba761e2b110036a9a71c05b373895ced97 Mon Feb 26 13:35:01 2018 -0800
    make sure collection tree is loaded before removing wait screen. Make hgTracks ajax requests synchronous to remove race condition
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    2dff2aae844982e070bdcb424b672db2aa203339 Wed Feb 28 08:30:59 2018 -0800
    fix sorting in visible tracks
  • lines changed 47, context: html, text, full: html, text
    e009d55d7ec2cec4c1ff526a0d18591a893e84ca Wed Feb 28 08:43:10 2018 -0800
    Revert "fix sorting in visible tracks" This reverts commit 2dff2aae844982e070bdcb424b672db2aa203339.
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    60e5e21fa51860f75ae9d43f0f2f7b336190e798 Wed Feb 28 09:30:33 2018 -0800
    fix sorting issue in visible tracks
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    cf979a71d0b61c948b39cb5f85b500f15cfb5c6c Wed Feb 28 14:00:15 2018 -0800
    fiddle with sorting of tracks in Visible Tracks yet again
  • lines changed 1, context: html, text, full: html, text
    11736c96fdabcee94132ff44fa7b318b42cc372d Thu Mar 1 10:44:33 2018 -0800
    change maxHeightPixels for collections
• src/hg/hgTracks/simpleTracks.c
  • lines changed 18, context: html, text, full: html, text
    e443dee06a48dc2ae206afcfb4a4478549503d33 Thu Mar 1 09:35:16 2018 -0800
    don't calculate (add, subtract) with tracks that are turned off
• src/hg/hgTracks/wigTrack.c
  • lines changed 1, context: html, text, full: html, text
    7cd02ccc08c2508efd2309541c59f684ea6cdd21 Tue Feb 27 13:34:55 2018 -0800
    fix bug with custom track wiggles in collections on assembly hubs
• src/hg/htdocs/FAQ/FAQdownloads.html
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    6ecb766c632ca56981c0097510c2cbe6512343ad Wed Feb 28 11:21:40 2018 -0800
    Changing a couple more links to point to genome-store, no ticket
• src/hg/htdocs/goldenPath/help/hgGeneGraph.html
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    26035cac851591ed472a8fd0367160a87049cd7f Tue Feb 27 15:55:00 2018 -0800
    fixing gene graph docs page, email from Bob
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    77bdc6e130241cb327e5726bd4f0421975a387cd Tue Feb 27 15:59:21 2018 -0800
    changed help text to match the actual pulldown menus
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    cfd158b2ed5ab6fe3612c8f08abb1716648f9a09 Tue Feb 27 16:12:12 2018 -0800
    changed help text to match the actual pulldown menus
• src/hg/htdocs/goldenPath/help/hgTracksHelp.html
  • lines changed 1, context: html, text, full: html, text
    043d924d087c09b9254b95af407f5133fb80d579 Wed Feb 28 11:15:05 2018 -0800
    Changing liftOver link to point to store, no ticket
• src/hg/htdocs/goldenPath/help/hubQuickStartGroups.html
  • lines changed 9, context: html, text, full: html, text
    e016d38df92b00baf44c34f4567c31a41162f6f0 Mon Feb 26 12:10:46 2018 -0800
    changing composite/superTrack docs to make it clearer that composites come first. No redmine, but OK emails from Bob and BrianL.
• src/hg/htdocs/goldenPath/help/mirror.html
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    8367a8b8af27ed3397845fdb40db0383dd600132 Mon Feb 26 15:15:45 2018 -0800
    white space changes after code review, refs #21035
• src/hg/htdocs/goldenPath/help/mysql.html
  • lines changed 1, context: html, text, full: html, text
    9eef111dca136bca6e9c54d5f26b267402d55cb8 Mon Feb 26 15:29:35 2018 -0800
    added timezone clarification
• src/hg/htdocs/images/hgCollectionClickToEditColor.jpg
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    cb961d7a44e89176adef910272091c3989815f62 Wed Feb 28 14:36:51 2018 -0800
    Adding another hgCollection image for help doc, refs #11630
• src/hg/htdocs/images/hgCollectionMergeMethod.jpg
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    910ab293a1e972a88e8db891ced62f77d8f3fe6a Mon Feb 26 15:33:46 2018 -0800
    Replacing an image for hgCollect help doc, refs #11630
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    64d46c613461bb2fda9d722e0a8fd24d0e1a8321 Mon Feb 26 16:55:35 2018 -0800
    Another round of hgCollect help edits, more to come. refs #11630
• src/hg/htdocs/images/hgCollectionMergeMethod.png
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    e56a06b5d3a9ef69cb74faf237f7c0b9c90d65fa Mon Feb 26 10:57:02 2018 -0800
    Adding another screenshot for hgCollect help, refs #11630
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    e3773da762f40461f62f7ec137436fbef106ce66 Mon Feb 26 15:50:21 2018 -0800
    Remove old hgCollect image, refs# 11630
• src/hg/htdocs/images/hgCollectionSetColor.jpg
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    e7fd6fde650d2c8153b8127800cfd1b6450c5031 Wed Feb 28 14:30:45 2018 -0800
    Adding another hgCollection image, refs #11630
• src/hg/htdocs/inc/hgCollection.html
  • lines changed 4, context: html, text, full: html, text
    64d46c613461bb2fda9d722e0a8fd24d0e1a8321 Mon Feb 26 16:55:35 2018 -0800
    Another round of hgCollect help edits, more to come. refs #11630
  • lines changed 7, context: html, text, full: html, text
    1993ba5dc7930a7b3a328d1993f86dac1614f49b Tue Feb 27 08:50:16 2018 -0800
    use fa-spinner for wait icon
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    2a2fa6cc978ba35c664d2349da1cf9ad97deb7e9 Wed Feb 28 16:49:10 2018 -0800
    More hgCollection help page edits, refs #11630
• src/hg/htdocs/inc/hgCollectionHelpInclude.html
  • lines changed 96, context: html, text, full: html, text
    64d46c613461bb2fda9d722e0a8fd24d0e1a8321 Mon Feb 26 16:55:35 2018 -0800
    Another round of hgCollect help edits, more to come. refs #11630
  • lines changed 103, context: html, text, full: html, text
    2a2fa6cc978ba35c664d2349da1cf9ad97deb7e9 Wed Feb 28 16:49:10 2018 -0800
    More hgCollection help page edits, refs #11630
• src/hg/htdocs/training/index.html
  • lines changed 4, context: html, text, full: html, text
    f5325fadf917db94d918eacde6f817262de9f000 Mon Feb 26 10:52:46 2018 -0800
    adding better link for rotterdam workshop
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    2c7f6dcc7d0c7cd5c73a3564b2c99fc78c63656b Thu Mar 1 13:16:27 2018 -0800
    adding genentech workshop
• src/hg/inc/versionInfo.h
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    233637b92cf24f9f4c70517a74723fa3cf79d530 Mon Mar 5 10:11:32 2018 -0800
    New version number v362
• src/hg/js/hgCollection.js
  • lines changed 28, context: html, text, full: html, text
    f01fbeba761e2b110036a9a71c05b373895ced97 Mon Feb 26 13:35:01 2018 -0800
    make sure collection tree is loaded before removing wait screen. Make hgTracks ajax requests synchronous to remove race condition
  • lines changed 14, context: html, text, full: html, text
    b941fc533ca6f91c5cafaa52e0af5382daff2bc0 Mon Feb 26 14:19:43 2018 -0800
    be smarter about recognizing leaf nodes in track grouping
• src/hg/js/hgTracks.js
  • lines changed 2, context: html, text, full: html, text
    f01fbeba761e2b110036a9a71c05b373895ced97 Mon Feb 26 13:35:01 2018 -0800
    make sure collection tree is loaded before removing wait screen. Make hgTracks ajax requests synchronous to remove race condition
• src/hg/lib/.gitignore
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    4c7ab1a453effcbb3e95219ff50fb116c2258934 Tue Feb 27 09:55:52 2018 -0800
    Adding gcc --coverage and gcov generated files.
• src/hg/lib/gwasCatalog.as
  • lines changed 1, context: html, text, full: html, text
    84c36f994fc859669fb91648e378778f5109c052 Wed Feb 28 17:00:49 2018 -0800
    Altering gwasCatalog table structure to allow longer allele lists, refs #18151
• src/hg/lib/gwasCatalog.sql
  • lines changed 1, context: html, text, full: html, text
    84c36f994fc859669fb91648e378778f5109c052 Wed Feb 28 17:00:49 2018 -0800
    Altering gwasCatalog table structure to allow longer allele lists, refs #18151
• src/hg/lib/hgHgvs.c
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    03ffd59683ac24c0eb8ac90b8f5589f71570a87f Tue Feb 27 14:16:28 2018 -0800
    HGVS p. term: if a single amino acid is duplicated, show the single position instead of range.
• src/hg/lib/hubConnect.c
  • lines changed 5, context: html, text, full: html, text
    01899c8f3d57fb8312feec65423f5053d64b85ef Mon Feb 26 13:54:01 2018 -0800
    let assembly hubs have groups from track hubs
• src/hg/lib/hui.c
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    25991b71901c630921e51b8123cadcd04ca97479 Tue Feb 27 15:39:02 2018 -0800
    fix brain dead bug I introduced with selecting density mode
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    a1a25461f126677f8e99a7cd07aa2f78089737c4 Thu Mar 1 10:19:33 2018 -0800
    don't put the View Schema link on hgTrackUi page for Collections
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    11736c96fdabcee94132ff44fa7b318b42cc372d Thu Mar 1 10:44:33 2018 -0800
    change maxHeightPixels for collections
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    439e1a973aaf1632845dfe0bca88d35a122d53fb Thu Mar 1 10:50:31 2018 -0800
    put out pixel range for custom composites in hgTrackUi
• src/hg/makeDb/doc/felCat9/initialBuild.txt
  • lines changed 853, context: html, text, full: html, text
    b2ff895fed0d25e3ac17d0024727edc2ffabb296 Tue Feb 27 14:16:27 2018 -0800
    running up repeat masker and simple repeats refs #21043
• src/hg/makeDb/doc/panTro4.txt
  • lines changed 79, context: html, text, full: html, text
    3a244c87a7c6037bad2432228b1794e8f0587e6e Tue Feb 27 09:43:44 2018 -0800
    lastz/chain/net to ponAbe2 per user request refs #20973
• src/hg/makeDb/genbank/etc/genbank.conf
  • lines changed 23, context: html, text, full: html, text
    9526d9796e0f58dfb6e45d10e6e22bcc685650e0 Wed Feb 28 11:16:16 2018 -0800
    adding felCat9/cat refs #21043
• src/hg/makeDb/trackDb/affyExonTissues.html
  • lines changed 6, context: html, text, full: html, text
    4729dd0c51296d542bb8fb3d0b8c139c051ea2ae Wed Feb 28 09:37:21 2018 -0800
    Fixing broken links for rn4, no Redmine.
• src/hg/makeDb/trackDb/bacEndPairs.html
  • lines changed 1, context: html, text, full: html, text
    4729dd0c51296d542bb8fb3d0b8c139c051ea2ae Wed Feb 28 09:37:21 2018 -0800
    Fixing broken links for rn4, no Redmine.
• src/hg/makeDb/trackDb/cat/felCat9/description.html
  • lines changed 64, context: html, text, full: html, text
    4a1637ab38f436c8326bf3086cb0dc1aecd58e99 Tue Feb 27 13:50:17 2018 -0800
    adding felCat9 to the browser refs #21043
• src/hg/makeDb/trackDb/cat/felCat9/gap.html
  • lines changed 31, context: html, text, full: html, text
    4a1637ab38f436c8326bf3086cb0dc1aecd58e99 Tue Feb 27 13:50:17 2018 -0800
    adding felCat9 to the browser refs #21043
• src/hg/makeDb/trackDb/cat/felCat9/gold.html
  • lines changed 35, context: html, text, full: html, text
    4a1637ab38f436c8326bf3086cb0dc1aecd58e99 Tue Feb 27 13:50:17 2018 -0800
    adding felCat9 to the browser refs #21043
• src/hg/makeDb/trackDb/cat/felCat9/trackDb.ra
  • lines changed 8, context: html, text, full: html, text
    4a1637ab38f436c8326bf3086cb0dc1aecd58e99 Tue Feb 27 13:50:17 2018 -0800
    adding felCat9 to the browser refs #21043
  • lines changed 5, context: html, text, full: html, text
    a5476ee961d54948cc494637450053c455861d5e Tue Feb 27 14:13:06 2018 -0800
    adding gold/assembly track search rule refs #21043
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    381d640d88fd576794c07e6f06e79d1ae1d73448 Wed Feb 28 11:39:09 2018 -0800
    adding ncbiRefSeq include refs #21043
• src/hg/makeDb/trackDb/chainSelf.html
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    c6cb3cbdb7a0f98c82e5c373207578e391072175 Mon Mar 5 09:25:15 2018 -0800
    Fixing broken links for danRer6, no Redmine.
• src/hg/makeDb/trackDb/cpgIslandGgfAndyMasked.html
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    4729dd0c51296d542bb8fb3d0b8c139c051ea2ae Wed Feb 28 09:37:21 2018 -0800
    Fixing broken links for rn4, no Redmine.
• src/hg/makeDb/trackDb/drosophila/bdtnpDnase.html
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    90a9e5938798920cbeb2774edf2df4eef37d568e Fri Mar 2 09:37:41 2018 -0800
    Fixing broken links for dm2, no Redmine
• src/hg/makeDb/trackDb/drosophila/chainAnoGam1.html
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    90a9e5938798920cbeb2774edf2df4eef37d568e Fri Mar 2 09:37:41 2018 -0800
    Fixing broken links for dm2, no Redmine
• src/hg/makeDb/trackDb/drosophila/chainApiMel2.html
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    90a9e5938798920cbeb2774edf2df4eef37d568e Fri Mar 2 09:37:41 2018 -0800
    Fixing broken links for dm2, no Redmine
• src/hg/makeDb/trackDb/drosophila/chainDp3.html
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    90a9e5938798920cbeb2774edf2df4eef37d568e Fri Mar 2 09:37:41 2018 -0800
    Fixing broken links for dm2, no Redmine
• src/hg/makeDb/trackDb/drosophila/chainDroAna1.html
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    90a9e5938798920cbeb2774edf2df4eef37d568e Fri Mar 2 09:37:41 2018 -0800
    Fixing broken links for dm2, no Redmine
• src/hg/makeDb/trackDb/drosophila/chainDroMoj1.html
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    90a9e5938798920cbeb2774edf2df4eef37d568e Fri Mar 2 09:37:41 2018 -0800
    Fixing broken links for dm2, no Redmine
• src/hg/makeDb/trackDb/drosophila/chainDroPer1.html
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    90a9e5938798920cbeb2774edf2df4eef37d568e Fri Mar 2 09:37:41 2018 -0800
    Fixing broken links for dm2, no Redmine
• src/hg/makeDb/trackDb/drosophila/chainDroSec1.html
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    90a9e5938798920cbeb2774edf2df4eef37d568e Fri Mar 2 09:37:41 2018 -0800
    Fixing broken links for dm2, no Redmine
• src/hg/makeDb/trackDb/drosophila/chainDroSim1.html
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    90a9e5938798920cbeb2774edf2df4eef37d568e Fri Mar 2 09:37:41 2018 -0800
    Fixing broken links for dm2, no Redmine
• src/hg/makeDb/trackDb/drosophila/chainDroVir1.html
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    90a9e5938798920cbeb2774edf2df4eef37d568e Fri Mar 2 09:37:41 2018 -0800
    Fixing broken links for dm2, no Redmine
• src/hg/makeDb/trackDb/drosophila/chainDroYak1.html
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    90a9e5938798920cbeb2774edf2df4eef37d568e Fri Mar 2 09:37:41 2018 -0800
    Fixing broken links for dm2, no Redmine
• src/hg/makeDb/trackDb/drosophila/dm2/affyDrosDevSignal.html
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    90a9e5938798920cbeb2774edf2df4eef37d568e Fri Mar 2 09:37:41 2018 -0800
    Fixing broken links for dm2, no Redmine
• src/hg/makeDb/trackDb/drosophila/dm2/affyDrosDevTransfrags.html
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    90a9e5938798920cbeb2774edf2df4eef37d568e Fri Mar 2 09:37:41 2018 -0800
    Fixing broken links for dm2, no Redmine
• src/hg/makeDb/trackDb/drosophila/dm2/bacEndPairs.html
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    90a9e5938798920cbeb2774edf2df4eef37d568e Fri Mar 2 09:37:41 2018 -0800
    Fixing broken links for dm2, no Redmine
• src/hg/makeDb/trackDb/drosophila/dm2/multiz15way.html
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    90a9e5938798920cbeb2774edf2df4eef37d568e Fri Mar 2 09:37:41 2018 -0800
    Fixing broken links for dm2, no Redmine
• src/hg/makeDb/trackDb/drosophila/dm2/phastConsElements15way.html
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    90a9e5938798920cbeb2774edf2df4eef37d568e Fri Mar 2 09:37:41 2018 -0800
    Fixing broken links for dm2, no Redmine
• src/hg/makeDb/trackDb/drosophila/dm2/picTar.html
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    90a9e5938798920cbeb2774edf2df4eef37d568e Fri Mar 2 09:37:41 2018 -0800
    Fixing broken links for dm2, no Redmine
• src/hg/makeDb/trackDb/drosophila/est.html
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    90a9e5938798920cbeb2774edf2df4eef37d568e Fri Mar 2 09:37:41 2018 -0800
    Fixing broken links for dm2, no Redmine
• src/hg/makeDb/trackDb/drosophila/evofold.html
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    90a9e5938798920cbeb2774edf2df4eef37d568e Fri Mar 2 09:37:41 2018 -0800
    Fixing broken links for dm2, no Redmine
• src/hg/makeDb/trackDb/drosophila/intronEst.html
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    90a9e5938798920cbeb2774edf2df4eef37d568e Fri Mar 2 09:37:41 2018 -0800
    Fixing broken links for dm2, no Redmine
• src/hg/makeDb/trackDb/drosophila/mrna.html
  • lines changed 1, context: html, text, full: html, text
    90a9e5938798920cbeb2774edf2df4eef37d568e Fri Mar 2 09:37:41 2018 -0800
    Fixing broken links for dm2, no Redmine
• src/hg/makeDb/trackDb/drosophila/netAnoGam1.html
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    90a9e5938798920cbeb2774edf2df4eef37d568e Fri Mar 2 09:37:41 2018 -0800
    Fixing broken links for dm2, no Redmine
• src/hg/makeDb/trackDb/drosophila/netApiMel2.html
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    90a9e5938798920cbeb2774edf2df4eef37d568e Fri Mar 2 09:37:41 2018 -0800
    Fixing broken links for dm2, no Redmine
• src/hg/makeDb/trackDb/drosophila/netDp3.html
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    90a9e5938798920cbeb2774edf2df4eef37d568e Fri Mar 2 09:37:41 2018 -0800
    Fixing broken links for dm2, no Redmine
• src/hg/makeDb/trackDb/drosophila/netDroAna1.html
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    90a9e5938798920cbeb2774edf2df4eef37d568e Fri Mar 2 09:37:41 2018 -0800
    Fixing broken links for dm2, no Redmine
• src/hg/makeDb/trackDb/drosophila/netDroMoj1.html
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    90a9e5938798920cbeb2774edf2df4eef37d568e Fri Mar 2 09:37:41 2018 -0800
    Fixing broken links for dm2, no Redmine
• src/hg/makeDb/trackDb/drosophila/netDroPer1.html
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    90a9e5938798920cbeb2774edf2df4eef37d568e Fri Mar 2 09:37:41 2018 -0800
    Fixing broken links for dm2, no Redmine
• src/hg/makeDb/trackDb/drosophila/netDroSec1.html
  • lines changed 3, context: html, text, full: html, text
    90a9e5938798920cbeb2774edf2df4eef37d568e Fri Mar 2 09:37:41 2018 -0800
    Fixing broken links for dm2, no Redmine
• src/hg/makeDb/trackDb/drosophila/netDroSim1.html
  • lines changed 3, context: html, text, full: html, text
    90a9e5938798920cbeb2774edf2df4eef37d568e Fri Mar 2 09:37:41 2018 -0800
    Fixing broken links for dm2, no Redmine
• src/hg/makeDb/trackDb/drosophila/netDroVir1.html
  • lines changed 3, context: html, text, full: html, text
    90a9e5938798920cbeb2774edf2df4eef37d568e Fri Mar 2 09:37:41 2018 -0800
    Fixing broken links for dm2, no Redmine
• src/hg/makeDb/trackDb/drosophila/netDroYak1.html
  • lines changed 3, context: html, text, full: html, text
    90a9e5938798920cbeb2774edf2df4eef37d568e Fri Mar 2 09:37:41 2018 -0800
    Fixing broken links for dm2, no Redmine
• src/hg/makeDb/trackDb/drosophila/refGene.html
  • lines changed 1, context: html, text, full: html, text
    90a9e5938798920cbeb2774edf2df4eef37d568e Fri Mar 2 09:37:41 2018 -0800
    Fixing broken links for dm2, no Redmine
• src/hg/makeDb/trackDb/geneid.html
  • lines changed 1, context: html, text, full: html, text
    4729dd0c51296d542bb8fb3d0b8c139c051ea2ae Wed Feb 28 09:37:21 2018 -0800
    Fixing broken links for rn4, no Redmine.
• src/hg/makeDb/trackDb/genscan.html
  • lines changed 1, context: html, text, full: html, text
    90a9e5938798920cbeb2774edf2df4eef37d568e Fri Mar 2 09:37:41 2018 -0800
    Fixing broken links for dm2, no Redmine
• src/hg/makeDb/trackDb/human/chainNetPlacental.ra
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    1abd74c14ea5b4e7a96f9e6a5941a1a61ee5e8af Thu Mar 1 22:23:28 2018 -0800
    adding chainNet definitions for criGriChoV2 refs #20540
• src/hg/makeDb/trackDb/human/trackDb.ra
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    7140201cf33552ce442df7f585cda379c2fbb8bf Sun Mar 4 22:13:53 2018 -0800
    adding phegeni tools and trackDb, refs #21052
• src/hg/makeDb/trackDb/makefile
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    4a1637ab38f436c8326bf3086cb0dc1aecd58e99 Tue Feb 27 13:50:17 2018 -0800
    adding felCat9 to the browser refs #21043
• src/hg/makeDb/trackDb/mgcFullMrna.html
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    4729dd0c51296d542bb8fb3d0b8c139c051ea2ae Wed Feb 28 09:37:21 2018 -0800
    Fixing broken links for rn4, no Redmine.
• src/hg/makeDb/trackDb/miRNA.html
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    4729dd0c51296d542bb8fb3d0b8c139c051ea2ae Wed Feb 28 09:37:21 2018 -0800
    Fixing broken links for rn4, no Redmine.
• src/hg/makeDb/trackDb/phastConsElements.html
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    c6cb3cbdb7a0f98c82e5c373207578e391072175 Mon Mar 5 09:25:15 2018 -0800
    Fixing broken links for danRer6, no Redmine.
• src/hg/makeDb/trackDb/pig/susScr2/numtSeq2012.html
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    594c361ca8010cf0a8c1dab99e7ad85c6fc218a9 Tue Feb 27 09:01:43 2018 -0800
    Fixing broken links for susScr2, no Redmine.
• src/hg/makeDb/trackDb/pubsBingBlat.html
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    4729dd0c51296d542bb8fb3d0b8c139c051ea2ae Wed Feb 28 09:37:21 2018 -0800
    Fixing broken links for rn4, no Redmine.
• src/hg/makeDb/trackDb/rat/affyRAE230.html
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    4729dd0c51296d542bb8fb3d0b8c139c051ea2ae Wed Feb 28 09:37:21 2018 -0800
    Fixing broken links for rn4, no Redmine.
• src/hg/makeDb/trackDb/rat/affyU34A.html
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    4729dd0c51296d542bb8fb3d0b8c139c051ea2ae Wed Feb 28 09:37:21 2018 -0800
    Fixing broken links for rn4, no Redmine.
• src/hg/makeDb/trackDb/rat/genotypeArrays.html
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    4729dd0c51296d542bb8fb3d0b8c139c051ea2ae Wed Feb 28 09:37:21 2018 -0800
    Fixing broken links for rn4, no Redmine.
• src/hg/makeDb/trackDb/rat/gnfAtlas2.html
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    4729dd0c51296d542bb8fb3d0b8c139c051ea2ae Wed Feb 28 09:37:21 2018 -0800
    Fixing broken links for rn4, no Redmine.
• src/hg/makeDb/trackDb/rat/rn4/knownGenePrevious.html
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    4729dd0c51296d542bb8fb3d0b8c139c051ea2ae Wed Feb 28 09:37:21 2018 -0800
    Fixing broken links for rn4, no Redmine.
• src/hg/makeDb/trackDb/rat/rn4/multiz9way.html
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    4729dd0c51296d542bb8fb3d0b8c139c051ea2ae Wed Feb 28 09:37:21 2018 -0800
    Fixing broken links for rn4, no Redmine.
• src/hg/makeDb/trackDb/rat/rn4/phastConsElements9way.html
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    4729dd0c51296d542bb8fb3d0b8c139c051ea2ae Wed Feb 28 09:37:21 2018 -0800
    Fixing broken links for rn4, no Redmine.
• src/hg/makeDb/trackDb/rat/rn4/rgdGene2.html
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    4729dd0c51296d542bb8fb3d0b8c139c051ea2ae Wed Feb 28 09:37:21 2018 -0800
    Fixing broken links for rn4, no Redmine.
• src/hg/makeDb/trackDb/rat/rn4/snp125.html
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    4729dd0c51296d542bb8fb3d0b8c139c051ea2ae Wed Feb 28 09:37:21 2018 -0800
    Fixing broken links for rn4, no Redmine.
• src/hg/makeDb/trackDb/rat/stsMapRat.html
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    4729dd0c51296d542bb8fb3d0b8c139c051ea2ae Wed Feb 28 09:37:21 2018 -0800
    Fixing broken links for rn4, no Redmine.
• src/hg/makeDb/trackDb/rgdQtl.html
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    4729dd0c51296d542bb8fb3d0b8c139c051ea2ae Wed Feb 28 09:37:21 2018 -0800
    Fixing broken links for rn4, no Redmine.
• src/hg/makeDb/trackDb/trackDb.chainNet.mammal.ra
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    1abd74c14ea5b4e7a96f9e6a5941a1a61ee5e8af Thu Mar 1 22:23:28 2018 -0800
    adding chainNet definitions for criGriChoV2 refs #20540
• src/hg/makeDb/trackDb/trackDb.ra
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    0db162751a27a02891ae50195b861ddec1a2d94c Mon Feb 26 13:45:28 2018 -0800
    taking back crispr track superTrack change
• src/hg/makeDb/trackDb/transMap.html
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    4729dd0c51296d542bb8fb3d0b8c139c051ea2ae Wed Feb 28 09:37:21 2018 -0800
    Fixing broken links for rn4, no Redmine.
• src/hg/makeDb/trackDb/zebrafish/danRer6/multiz6way.html
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    c6cb3cbdb7a0f98c82e5c373207578e391072175 Mon Mar 5 09:25:15 2018 -0800
    Fixing broken links for danRer6, no Redmine.
• src/hg/makeDb/trackDb/zebrafish/mgcFullMrna.html
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    c6cb3cbdb7a0f98c82e5c373207578e391072175 Mon Mar 5 09:25:15 2018 -0800
    Fixing broken links for danRer6, no Redmine.
• src/hg/utils/automation/doGapOverlap.pl
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    71b2d10663a0e3be6c6b972bbbf3113af239e860 Mon Feb 26 10:49:06 2018 -0800
    correctly check for previous result for doLoad no redmine
• src/hg/utils/automation/doTandemDup.pl
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    29f9c9f888ff44e55ffce03f5230407fe50f3820 Tue Feb 27 15:29:20 2018 -0800
    correct use of paraRun string refs #21043
• src/inc/srcVersion.h
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    233637b92cf24f9f4c70517a74723fa3cf79d530 Mon Mar 5 10:11:32 2018 -0800
    New version number v362
• src/lib/memgfx.c
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    943e5ff0db038f9fbba7c27b2f5adca07172b741 Mon Feb 26 19:30:23 2018 -0800
    fix a bug Angie found in mixDot
• src/utils/makefile
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    7140201cf33552ce442df7f585cda379c2fbb8bf Sun Mar 4 22:13:53 2018 -0800
    adding phegeni tools and trackDb, refs #21052
• src/utils/phegenToBed
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    7140201cf33552ce442df7f585cda379c2fbb8bf Sun Mar 4 22:13:53 2018 -0800
    adding phegeni tools and trackDb, refs #21052
• src/utils/qa/weeklybld/buildEnv.csh
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    d14793a4f39bfb484b6747a00e0cd8b14f22063d Mon Mar 5 10:10:40 2018 -0800
    v362 final build refs #20999

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