Commits for hiram

v362_preview2 to v362_base (2018-02-26 to 2018-03-05) v362

71b2d10663a0e3be6c6b972bbbf3113af239e860 Mon Feb 26 10:49:06 2018 -0800

• correctly check for previous result for doLoad no redmine
  • src/hg/utils/automation/doGapOverlap.pl - lines changed 1, context: html, text, full: html, text

3a244c87a7c6037bad2432228b1794e8f0587e6e Tue Feb 27 09:43:44 2018 -0800

• lastz/chain/net to ponAbe2 per user request refs #20973
  • src/hg/makeDb/doc/panTro4.txt - lines changed 79, context: html, text, full: html, text

4a1637ab38f436c8326bf3086cb0dc1aecd58e99 Tue Feb 27 13:50:17 2018 -0800

• adding felCat9 to the browser refs #21043
  • src/hg/makeDb/trackDb/cat/felCat9/description.html - lines changed 64, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/cat/felCat9/gap.html - lines changed 31, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/cat/felCat9/gold.html - lines changed 35, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/cat/felCat9/trackDb.ra - lines changed 8, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/makefile - lines changed 1, context: html, text, full: html, text

a5476ee961d54948cc494637450053c455861d5e Tue Feb 27 14:13:06 2018 -0800

• adding gold/assembly track search rule refs #21043
  • src/hg/makeDb/trackDb/cat/felCat9/trackDb.ra - lines changed 5, context: html, text, full: html, text

b2ff895fed0d25e3ac17d0024727edc2ffabb296 Tue Feb 27 14:16:27 2018 -0800

• running up repeat masker and simple repeats refs #21043
  • src/hg/makeDb/doc/felCat9/initialBuild.txt - lines changed 853, context: html, text, full: html, text

29f9c9f888ff44e55ffce03f5230407fe50f3820 Tue Feb 27 15:29:20 2018 -0800

• correct use of paraRun string refs #21043
  • src/hg/utils/automation/doTandemDup.pl - lines changed 1, context: html, text, full: html, text

9526d9796e0f58dfb6e45d10e6e22bcc685650e0 Wed Feb 28 11:16:16 2018 -0800

• adding felCat9/cat refs #21043
  • src/hg/makeDb/genbank/etc/genbank.conf - lines changed 23, context: html, text, full: html, text

381d640d88fd576794c07e6f06e79d1ae1d73448 Wed Feb 28 11:39:09 2018 -0800

• adding ncbiRefSeq include refs #21043
  • src/hg/makeDb/trackDb/cat/felCat9/trackDb.ra - lines changed 2, context: html, text, full: html, text

1abd74c14ea5b4e7a96f9e6a5941a1a61ee5e8af Thu Mar 1 22:23:28 2018 -0800

• adding chainNet definitions for criGriChoV2 refs #20540
  • src/hg/makeDb/trackDb/human/chainNetPlacental.ra - lines changed 17, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/trackDb.chainNet.mammal.ra - lines changed 51, context: html, text, full: html, text

d14793a4f39bfb484b6747a00e0cd8b14f22063d Mon Mar 5 10:10:40 2018 -0800

• v362 final build refs #20999
  • src/utils/qa/weeklybld/buildEnv.csh - lines changed 3, context: html, text, full: html, text

233637b92cf24f9f4c70517a74723fa3cf79d530 Mon Mar 5 10:11:32 2018 -0800

• New version number v362
  • src/hg/inc/versionInfo.h - lines changed 1, context: html, text, full: html, text
  • src/inc/srcVersion.h - lines changed 1, context: html, text, full: html, text