4cf95232e85ac3114851417bbdc1ef9b51465761 markd Thu Feb 15 10:46:07 2018 -0800 fixed typo in function names diff --git src/hg/lib/genbank.c src/hg/lib/genbank.c index 149efee..7ca0da9 100644 --- src/hg/lib/genbank.c +++ src/hg/lib/genbank.c @@ -402,42 +402,42 @@ /* Accession prefixes indicating patent sequences, taken from: * https://www.ncbi.nlm.nih.gov/Sequin/acc.html */ static char *genbankPatentPrefixes[] = { "E", "BD", "DD", "DI", "DJ", "DL", "DM", "FU", "FV", "FW", "FZ", "GB", "HV", "HW", "HZ", "LF", "LG", "LV", "LX", "LY", "LZ", "MA", "MB", "A", "AX", "CQ", "CS", "FB", "GM", "GN", "HA", "HB", "HC", "HD", "HH", "HI", "JA", "JB", "JC", "JD", "JE", "LP", "LQ", "MP", "MQ", "MR", "MS", "I", "AR", "DZ", "EA", "GC", "GP", "GV", "GX", "GY", "GZ", "HJ", "HK", "HL", "KH", "MI", NULL }; static struct hash *genbankPatentPrefixesHash = NULL; -static void makeGenbenkPatentPrefixHash(void) +static void makeGenbankPatentPrefixHash(void) /* build hash of genbank accession prefixes on first uses */ { int i; genbankPatentPrefixesHash = hashNew(0); for (i = 0; genbankPatentPrefixes[i] != NULL; i++) hashAddInt(genbankPatentPrefixesHash, genbankPatentPrefixes[i], TRUE); } -boolean isGenbenkPatentAccession(char *acc) +boolean isGenbankPatentAccession(char *acc) /* Is this an accession prefix allocated to patent sequences. */ { if (genbankPatentPrefixesHash == NULL) - makeGenbenkPatentPrefixHash(); + makeGenbankPatentPrefixHash(); if (strlen(acc) >= GENBANK_ACC_BUFSZ) return FALSE; // too big, shouldn't happen // drop numeric part char accbuf[GENBANK_ACC_BUFSZ]; safecpy(accbuf, sizeof(accbuf), acc); char *numPtr = skipToNumeric(accbuf); if (numPtr == NULL) return FALSE; // doesn't look like genbank acc *numPtr = '\0'; return hashLookup(genbankPatentPrefixesHash, accbuf) != NULL; }