Commits for galt

d12952c125be21476e79af0676064e8fe3b3a9f1 Wed Mar 28 22:02:52 2018 -0700

adding missing cdwQaAgent script used by pipeline for validation. adding missing cdwCreateGroup to makefile.
- src/hg/cirm/cdw/cdwQaAgent/cdwQaAgent - lines changed 13, context: html, text, full: html, text
- src/hg/cirm/cdw/cdwQaAgent/makefile - lines changed 2, context: html, text, full: html, text
- src/hg/cirm/cdw/makefile - lines changed 2, context: html, text, full: html, text

2d67474e380be456bfb674a61553cfa0f3d4ad90 Fri Mar 30 23:32:21 2018 -0700

adding a hack of a little program to clean out failed job rows (and duplicate success rows) from cdwJob. Only to be run when the batch is no active with anything queued or running, and there are still some failures which were not fixed by the previous retry. Then run this program and it will clear out the cdwJob table for the given submitId, leaving only failed jobs that were NOT successfully re-run later. This allows it to mitigate a bug in cdwCheckValidation retry.
- src/hg/cirm/cdw/oneShot/cdwJobCleanFailed/cdwJobCleanFailed.c - lines changed 126, context: html, text, full: html, text
- src/hg/cirm/cdw/oneShot/cdwJobCleanFailed/makefile - lines changed 3, context: html, text, full: html, text

1cfdc355ddaee18b9bbd275b7185ac79a8548d3d Fri Mar 30 23:39:39 2018 -0700

fixed clean target in makefile
- src/hg/cirm/cdw/cdwQaAgent/makefile - lines changed 3, context: html, text, full: html, text

bc9feb9a6512078e52149ffb1bb0eff266d62339 Sat Mar 31 14:01:26 2018 -0700

Fixing bug caused by our last race mitigation. We were no longer getting duplicate rows in cdwValidFile, but now the babyName was not getting changed to a licensePlate after a successful retry.
- src/hg/cirm/cdw/cdwMakeValidFile/cdwMakeValidFile.c - lines changed 16, context: html, text, full: html, text