Commits for jnavarr5

db54508a9cc19b08e4eaef5e054d6f44a8d09008 Tue May 1 10:15:20 2018 -0700

Updating redirected links for felCat4, uiLinks cronjob.
- src/hg/makeDb/trackDb/cat/felCat4/cons6way.html - lines changed 8, context: html, text, full: html, text

ac3e1d2b6e2bcb58d921561589199e234752208a Tue May 1 10:32:56 2018 -0700

Updating redirected links for bosTau4, uiLinks cronjob.
- src/hg/makeDb/trackDb/cow/bosTau4/multiz5way.html - lines changed 7, context: html, text, full: html, text
- src/hg/makeDb/trackDb/cow/bosTau4/nscanGene.html - lines changed 4, context: html, text, full: html, text
- src/hg/makeDb/trackDb/cow/bosTau4/phastConsElements5way.html - lines changed 5, context: html, text, full: html, text

06d128b093e205b5229a60635d98bc0486c8b2bb Wed May 2 09:11:18 2018 -0700

Updating redirected links for xenTro2, uiLinks cronjob.
- src/hg/makeDb/trackDb/rmsk.html - lines changed 2, context: html, text, full: html, text
- src/hg/makeDb/trackDb/xenTro/xenTro2/multiz7way.html - lines changed 7, context: html, text, full: html, text
- src/hg/makeDb/trackDb/xenTro/xenTro2/phastConsElements7way.html - lines changed 5, context: html, text, full: html, text

e861279221fda6033b6a2a0aa0d5d9fc3422d5fe Wed May 2 10:23:40 2018 -0700

Adding beta release tags for the GENCODE V28 release for hg38 and hg19, refs #21266 and #21299
- src/hg/makeDb/trackDb/human/hg19/trackDb.gencode.ra - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg38/trackDb.gencode.ra - lines changed 1, context: html, text, full: html, text

b8acf1f4f9601e579622dd85a951ef513aa06515 Wed May 2 12:43:12 2018 -0700

Removing alpha,beta tags now that the track is on hgwbeta-public, refs #21266 and #21299
- src/hg/makeDb/trackDb/human/hg19/trackDb.gencode.ra - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg38/trackDb.gencode.ra - lines changed 1, context: html, text, full: html, text

70bc2fb35cf9a8a2bf193f581c8d1505d49e17f9 Wed May 2 12:54:31 2018 -0700

Hiding the new lifted GENCODE V28 tracks for hg19 by default, refs #21299
- src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeV28lift37.ra - lines changed 1, context: html, text, full: html, text

031adb2c7dea4c4b45e8a440b7e040b8738590c6 Thu May 3 12:58:27 2018 -0700

Announcing the GENCODE V28 annotation release for hg19 and hg38. refs #21299 and #21266
- src/hg/htdocs/goldenPath/newsarch.html - lines changed 26, context: html, text, full: html, text
- src/hg/htdocs/indexNews.html - lines changed 12, context: html, text, full: html, text

06217c715454d91fa9271f4c8644f44ed2a26a8d Thu May 3 13:17:21 2018 -0700

bd1a670e7c90cf8b1209e0ebeddd6437df2e7006 Thu May 3 14:14:54 2018 -0700

Making a small edit the the GENCODE V28 news announcement, no Redmine.
- src/hg/htdocs/goldenPath/newsarch.html - lines changed 5, context: html, text, full: html, text

82e5f4b859a69478e522ca0e135f27de4415408f Thu May 3 14:17:26 2018 -0700

Adding the 'Updated' pennantIcon for the GENCODE V28 release for hg38 and hg19, refs #21266 and #21299.
- src/hg/makeDb/trackDb/human/hg19/trackDb.gencode.ra - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeV28lift37.ra - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg38/trackDb.gencode.ra - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg38/wgEncodeGencodeV28.ra - lines changed 1, context: html, text, full: html, text

478a356a31e8537d682ee0b821f5c64a9eb295b3 Fri May 4 09:09:08 2018 -0700

Updating redirected links for melGal1, uiLinks cronjob.
- src/hg/makeDb/trackDb/nestedRepeats.html - lines changed 2, context: html, text, full: html, text