Commits for chmalee

v365_preview to v365_preview2 (2018-04-23 to 2018-04-30) v365

5f0f3b8d9d16b4999bf27d629b91daaaeefe510e Tue Apr 24 14:00:50 2018 -0700

• starting genbank updates for oviAri4/sheep refs #17247
  • src/hg/makeDb/genbank/etc/align.dbs - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/genbank/etc/genbank.conf - lines changed 23, context: html, text, full: html, text
  • src/hg/makeDb/genbank/etc/hgwdev.dbs - lines changed 2, context: html, text, full: html, text

ac5aa3a348ea06eb9e14762a7affc66bfcdb0d9e Wed Apr 25 10:55:55 2018 -0700

• mm10/oviAri4 chain net doc, refs #17247
  • src/hg/makeDb/doc/mm10.txt - lines changed 63, context: html, text, full: html, text

89f6176ceb850ad98abdf610b628fa1503f33e56 Thu Apr 26 10:05:00 2018 -0700

• Steps to rerun lastz for mm10/oviAri4
  • src/hg/makeDb/doc/mm10.txt - lines changed 17, context: html, text, full: html, text

e3ca4d83e5f6dac273754f3e6e1dbd551da4981f Fri Apr 27 10:27:29 2018 -0700

• Starting swap for mm10/oviAri4
  • src/hg/makeDb/doc/mm10.txt - lines changed 2, context: html, text, full: html, text

06774e95703e3e61767e5aeac2f41f3b8d3e987f Fri Apr 27 10:35:40 2018 -0700

• Adding oviAri4 to all.joiner, refs #17247
  • src/hg/makeDb/schema/all.joiner - lines changed 9, context: html, text, full: html, text

a8e14b375134503a2f8e6c17aa656c9d3f16bfbe Fri Apr 27 11:13:57 2018 -0700

• Adding results of syntenic net featureBits to mm10/oviAri4, refs #17247
  • src/hg/makeDb/doc/mm10.txt - lines changed 3, context: html, text, full: html, text

66352ae3358639042fb162edab5f1808f22151ff Fri Apr 27 11:17:23 2018 -0700

• Adding gold table search rule fixup for oviAri4, refs #17247
  • src/hg/makeDb/trackDb/sheep/oviAri4/trackDb.ra - lines changed 7, context: html, text, full: html, text

1d4793ea4a2df0d10ab4f25a2b74918105694f70 Fri Apr 27 11:46:08 2018 -0700

• Starting recip best after the swap finished, refs #17247
  • src/hg/makeDb/doc/mm10.txt - lines changed 5, context: html, text, full: html, text

46aac13f8a4781c2616661f37573a9f95f151de7 Mon Apr 30 08:06:08 2018 -0700

• Done with recipbest for mm10/oviAri4, refs #17247
  • src/hg/makeDb/doc/mm10.txt - lines changed 4, context: html, text, full: html, text

019a227038abb584cc6f53bdb9c1c381b5723d45 Mon Apr 30 08:24:54 2018 -0700

• Getting sheep chain/nets into the right hg38 and mm10 composites, refs #17247
  • src/hg/makeDb/trackDb/human/chainNetPlacental.ra - lines changed 16, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm10/trackDb.placentalsChainNet.ra - lines changed 16, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/trackDb.chainNet.laurasiatheria.ra - lines changed 59, context: html, text, full: html, text