Commits for jnavarr5

v367_preview to v367_preview2 (2018-06-04 to 2018-06-11) v367

bd83c1fe5613efb06a257f2c640ca9182c830bcc Tue Jun 5 11:14:48 2018 -0700

• Updating redirected and broken links for hg16, uiLinks cronjob.
  • src/hg/makeDb/trackDb/ECgene.html - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/fishClones.html - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/affyHuEx1.html - lines changed 13, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/affyHumanExon.html - lines changed 4, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/altGraphX.html - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/cytoBand.html - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/encodeAffyChIpHl60Pval.html - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/encodeAffyChIpHl60Sites.html - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/encodeAffyEncode25bpProbes.html - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/encodeBuFirstExon.html - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/encodeBu_ORChID1.html - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/encodeEgaspFull.html - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/encodeEgaspPartial.html - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/encodeEgaspSuper.html - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/encodeEgaspUpdate.html - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/encodeHapMapAlleleFreq.html - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/encodeHapMapCov.html - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/encodeRecombHotspot.html - lines changed 4, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/encodeRecombRate.html - lines changed 4, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/encodeReseqRegions.html - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/encodeSangerGenoExprAssociation.html - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/encodeStanfordMeth.html - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/encodeStanfordMethSmoothed.html - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/haplotype.html - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/acembly.html - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/affyU133.html - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/chainSelf.html - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/chimpDels.html - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/cnp.html - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/ecoresFr1.html - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/ecoresTetraodon.html - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/encodeAffyRnaSignal.html - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/encodeAffyRnaTransfrags.html - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/encodeAllElements.html - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/encodeGencodeGene.html - lines changed 8, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/encodeGencodeIntron.html - lines changed 7, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/encodeGisChipPet.html - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/encodeGisRnaPet.html - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/encodeMlaganAlign.html - lines changed 4, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/encodeMlaganCons.html - lines changed 5, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/encodeMlaganElements.html - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/encodeNhgriDnaseHs.html - lines changed 6, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/encodeRegulomeAmplicon.html - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/encodeRegulomeBase.html - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/encodeRegulomeProb.html - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/encodeRegulomeQuality.html - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/encodeSangerChipH3H4.html - lines changed 16, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/encodeTbaAlign.html - lines changed 4, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/encodeTbaCons.html - lines changed 5, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/encodeTbaElements.html - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/encodeUCDavisE2F1Median.html - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/encodeUcsdNgGif.html - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/encodeYaleAffyRNATars.html - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/encodeYaleAffyRNATransMap.html - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/encode_tba23EvoFold.html - lines changed 5, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/exoniphy.html - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/hapmapLd.html - lines changed 8, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/hg17Kg.html - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/mzPt1Mm3Rn3Gg2_pHMM.html - lines changed 7, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/rBestChainPanTro1.html - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/rBestNetPanTro1.html - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/regPotential2X.html - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/regPotential3X.html - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/tfbsCons.html - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/twinscan.html - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg16/uniGene_2.html - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/nhgriDnaseHs.html - lines changed 6, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/perlegen.html - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/snpRecombHotspot.html - lines changed 5, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/snpRecombRate.html - lines changed 5, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/stsMap.html - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/tajD.html - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/tajdSnp.html - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/vegaGene.html - lines changed 22, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/vegaPseudoGene.html - lines changed 22, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/knownGene.html - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/miRNA.html - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/snp.html - lines changed 4, context: html, text, full: html, text

6589054021f881a8d9e10297724434d10713e02e Fri Jun 8 11:32:04 2018 -0700

• Updating the HTML page to conform to our HTML guidelines, refs #18951
  • src/hg/makeDb/trackDb/human/hg19/gnomad.html - lines changed 35, context: html, text, full: html, text

c174a17abc268ae287c8f3e55fe14acbfbb63b77 Fri Jun 8 14:31:38 2018 -0700

• Reorganizing the Display Convections section for the gnomAD 2.0 track description page, refs #18951
  • src/hg/makeDb/trackDb/human/hg19/gnomad.html - lines changed 14, context: html, text, full: html, text