008c1354e9fce6bef2c4d494a1afc8f22b92c56a
kate
Fri Jun 8 11:43:29 2018 -0700
Add links to GTEx body map page: hgGene details, hgc for GTEx tracks, gene sorter column info. refs #18628
diff --git src/hg/hgGene/gtex.c src/hg/hgGene/gtex.c
index f39316c..2248b11 100644
--- src/hg/hgGene/gtex.c
+++ src/hg/hgGene/gtex.c
@@ -70,32 +70,34 @@
assert(gtexGene);
int tisId;
float highestLevel = gtexGeneHighestMedianExpression(gtexGene, &tisId);
char *highestTissue = gtexGetTissueDescription(tisId, NULL);
float totalLevel = gtexGeneTotalMedianExpression(gtexGene);
printf("Highest median expression: %0.2f RPKM in %s\n", highestLevel, highestTissue);
printf("
Total median expression: %0.2f RPKM
\n", totalLevel);
struct tempName pngTn;
if (gtexGeneBoxplot(ensGene, NULL, GTEX_DEFAULT_VERSION, FALSE, &pngTn))
hPrintf("
\n", pngTn.forHtml);
hPrintf("
"
"View in GTEx track of Genome Browser",
cartSidUrlString(cart), curGeneChrom, curGeneStart, curGeneEnd);
-
hPrintf(" ");
+
gtexPortalLink(ensGene);
+hPrintf(" ");
+gtexBodyMapLink();
}
struct section *gtexSection(struct sqlConnection *conn, struct hash *sectionRa)
/* Create GTEx gene expression section. */
{
struct section *section = sectionNew(sectionRa, "gtex");
if (section != NULL)
{
section->exists = gtexExists;
section->print = gtexPrint;
}
return section;
}