Commits for angie

v368_base to v369_preview (2018-07-09 to 2018-07-16) v369

7f43d805474b52bfbb2a19da8ed8e9559a64f1b9 Tue Jul 10 14:22:09 2018 -0700

• Adding note about dbSNP's different method for determining a subset of common variants.
  • src/hg/makeDb/trackDb/human/snp151Common.html - lines changed 29, context: html, text, full: html, text

e3960c409f105aaaa00976d0d72811487d6cb4d7 Tue Jul 10 14:29:53 2018 -0700

• Adding note about dbSNP's different method for determining a subset of common variants.
  • src/hg/makeDb/trackDb/human/snp150Common.html - lines changed 30, context: html, text, full: html, text

205d4d9abc4262f430203184d1b62fe24250a33f Fri Jul 13 13:17:25 2018 -0700

• Adding test case for agpAlign. refs #21660
  • src/hg/utils/agpAlign/tests/expected/testHg19ToHg38.psl - lines changed 54, context: html, text, full: html, text
  • src/hg/utils/agpAlign/tests/expected/testHg38ToHg19.psl - lines changed 54, context: html, text, full: html, text
  • src/hg/utils/agpAlign/tests/input/test.hg19.chrom.sizes - lines changed 1, context: html, text, full: html, text
  • src/hg/utils/agpAlign/tests/input/test.hg19.comp.agp - lines changed 52, context: html, text, full: html, text
  • src/hg/utils/agpAlign/tests/input/test.hg38.chrom.sizes - lines changed 1, context: html, text, full: html, text
  • src/hg/utils/agpAlign/tests/input/test.hg38.comp.agp - lines changed 77, context: html, text, full: html, text
  • src/hg/utils/agpAlign/tests/makefile - lines changed 24, context: html, text, full: html, text

122bc264524b1dd6efc9dea3d59812c3da3529a1 Fri Jul 13 16:50:19 2018 -0700

• Adding test cases for chainBridge. refs #21660
  • src/hg/mouseStuff/chainBridge/tests/expected/awful.bridged.chain - lines changed 5, context: html, text, full: html, text
  • src/hg/mouseStuff/chainBridge/tests/expected/noChange.bridged.chain - lines changed 12, context: html, text, full: html, text
  • src/hg/mouseStuff/chainBridge/tests/expected/someChange.bridged.chain - lines changed 16, context: html, text, full: html, text
  • src/hg/mouseStuff/chainBridge/tests/input/hg19ToHg38.awful.chain - lines changed 5, context: html, text, full: html, text
  • src/hg/mouseStuff/chainBridge/tests/input/hg19ToHg38.noChange.chain - lines changed 12, context: html, text, full: html, text
  • src/hg/mouseStuff/chainBridge/tests/input/hg19ToHg38.someChange.chain - lines changed 18, context: html, text, full: html, text
  • src/hg/mouseStuff/chainBridge/tests/makefile - lines changed 27, context: html, text, full: html, text