7f7b1d915bb9dd28229092ea4f2de80c3646a131
kate
  Tue Sep 18 17:17:38 2018 -0700
Additional validation for interact coords, and a tool to correct them. refs #21917

diff --git src/hg/inc/interact.h src/hg/inc/interact.h
index c45e14a..58e8983 100644
--- src/hg/inc/interact.h
+++ src/hg/inc/interact.h
@@ -86,29 +86,36 @@
 #define interactTabOut(el,f) interactOutput(el,f,'\t','\n');
 /* Print out interact as a line in a tab-separated file. */
 
 #define interactCommaOut(el,f) interactOutput(el,f,',',',');
 /* Print out interact as a comma separated list including final comma. */
 
 /* -------------------------------- End autoSql Generated Code -------------------------------- */
 
 struct asObject *interactAsObj();
 /* Return asObject describing fields of barChart database table (includes bin) */
 
 struct interact *interactLoadAndValidate(char **row);
 /* Load a interact from row fetched with select * from interact
  * from database, validating fields.  Dispose of this with interactFree(). */
 
+struct interact *interactLoadAllAndValidate(char *fileName);
+/* Load all interact from a whitespace-separated file.
+ * Dispose of this with interactFreeList(). */
+
+void interactFixRange(struct interact *inter);
+/* Set values for chromStart/chromEnd based on source and target start/ends */
+
 char *interactOtherChrom(struct interact *inter);
 /* Get other chromosome from an interaaction. Return NULL if same chromosome */
 
 int interactRegionCenter(int start, int end);
 /* Return genomic location of center of region */
 
 int interactRegionDistance(struct interact *inter);
 /* Return distance between region midpoints. Return -1 for other chromosome */
 
 int interactDistanceCmp(const void *va, const void *vb);
 /* Compare based on distance between region midpoints */
 
 #endif /* INTERACT_H */