File Changes for markd

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v374_preview2 to v374_base (2018-11-05 to 2018-11-12) v374

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src/hg/inc/encode/wgEncodeGencodeGeneSymbol.h
- lines changed 64, context: html, text, full: html, text
  0bba06928b53c75f8f04c13f50319650982938b8 Sat Nov 10 15:47:34 2018 -0800
  renamed new gencode table for hgnc to geneSymbol, since mouse has MGI not HGNC. Import of GENCODE mouse VM19;
src/hg/inc/encode/wgEncodeGencodeHgnc.h
- lines changed 64, context: html, text, full: html, text
  00a0d93a2032a4547ae62657fb98edd8247888ce Fri Nov 9 18:24:43 2018 -0800
  added gencode V29 final
- lines changed 64, context: html, text, full: html, text
  0bba06928b53c75f8f04c13f50319650982938b8 Sat Nov 10 15:47:34 2018 -0800
  renamed new gencode table for hgnc to geneSymbol, since mouse has MGI not HGNC. Import of GENCODE mouse VM19;
src/hg/lib/encode/wgEncodeGencodeGeneSymbol.as
- lines changed 6, context: html, text, full: html, text
  0bba06928b53c75f8f04c13f50319650982938b8 Sat Nov 10 15:47:34 2018 -0800
  renamed new gencode table for hgnc to geneSymbol, since mouse has MGI not HGNC. Import of GENCODE mouse VM19;
src/hg/lib/encode/wgEncodeGencodeGeneSymbol.c
- lines changed 126, context: html, text, full: html, text
  0bba06928b53c75f8f04c13f50319650982938b8 Sat Nov 10 15:47:34 2018 -0800
  renamed new gencode table for hgnc to geneSymbol, since mouse has MGI not HGNC. Import of GENCODE mouse VM19;
- lines changed 1, context: html, text, full: html, text
  22e980eb254f6bfc8c6b5c9ef7a067297d96bcd4 Sun Nov 11 04:52:32 2018 -0800
  missed manual edit of genereated file
src/hg/lib/encode/wgEncodeGencodeGeneSymbol.sql
- lines changed 12, context: html, text, full: html, text
  0bba06928b53c75f8f04c13f50319650982938b8 Sat Nov 10 15:47:34 2018 -0800
  renamed new gencode table for hgnc to geneSymbol, since mouse has MGI not HGNC. Import of GENCODE mouse VM19;
src/hg/lib/encode/wgEncodeGencodeHgnc.as
- lines changed 6, context: html, text, full: html, text
  00a0d93a2032a4547ae62657fb98edd8247888ce Fri Nov 9 18:24:43 2018 -0800
  added gencode V29 final
- lines changed 6, context: html, text, full: html, text
  0bba06928b53c75f8f04c13f50319650982938b8 Sat Nov 10 15:47:34 2018 -0800
  renamed new gencode table for hgnc to geneSymbol, since mouse has MGI not HGNC. Import of GENCODE mouse VM19;
src/hg/lib/encode/wgEncodeGencodeHgnc.c
- lines changed 126, context: html, text, full: html, text
  00a0d93a2032a4547ae62657fb98edd8247888ce Fri Nov 9 18:24:43 2018 -0800
  added gencode V29 final
- lines changed 126, context: html, text, full: html, text
  0bba06928b53c75f8f04c13f50319650982938b8 Sat Nov 10 15:47:34 2018 -0800
  renamed new gencode table for hgnc to geneSymbol, since mouse has MGI not HGNC. Import of GENCODE mouse VM19;
src/hg/lib/encode/wgEncodeGencodeHgnc.sql
- lines changed 12, context: html, text, full: html, text
  00a0d93a2032a4547ae62657fb98edd8247888ce Fri Nov 9 18:24:43 2018 -0800
  added gencode V29 final
- lines changed 12, context: html, text, full: html, text
  0bba06928b53c75f8f04c13f50319650982938b8 Sat Nov 10 15:47:34 2018 -0800
  renamed new gencode table for hgnc to geneSymbol, since mouse has MGI not HGNC. Import of GENCODE mouse VM19;
src/hg/lib/makefile
- lines changed 1, context: html, text, full: html, text
  0bba06928b53c75f8f04c13f50319650982938b8 Sat Nov 10 15:47:34 2018 -0800
  renamed new gencode table for hgnc to geneSymbol, since mouse has MGI not HGNC. Import of GENCODE mouse VM19;
src/hg/makeDb/doc/hg19.txt
- lines changed 36, context: html, text, full: html, text
  97ce2992da15a56f4bf44c30918586189ebed5d4 Sat Nov 10 08:00:59 2018 -0800
  fixed release data label on All GENCODE V29
- lines changed 15, context: html, text, full: html, text
  e35316da983301ef1a6fb40490a08e52333e9908 Sat Nov 10 11:34:18 2018 -0800
  import of All GENCODE v29lift37
src/hg/makeDb/doc/hg38/hg38.txt
- lines changed 34, context: html, text, full: html, text
  00a0d93a2032a4547ae62657fb98edd8247888ce Fri Nov 9 18:24:43 2018 -0800
  added gencode V29 final
- lines changed 1, context: html, text, full: html, text
  97ce2992da15a56f4bf44c30918586189ebed5d4 Sat Nov 10 08:00:59 2018 -0800
  fixed release data label on All GENCODE V29
src/hg/makeDb/doc/mm10.txt
- lines changed 37, context: html, text, full: html, text
  0bba06928b53c75f8f04c13f50319650982938b8 Sat Nov 10 15:47:34 2018 -0800
  renamed new gencode table for hgnc to geneSymbol, since mouse has MGI not HGNC. Import of GENCODE mouse VM19;
src/hg/makeDb/outside/gencode/gencodeGenerateTrackDbs
- lines changed 6, context: html, text, full: html, text
  00a0d93a2032a4547ae62657fb98edd8247888ce Fri Nov 9 18:24:43 2018 -0800
  added gencode V29 final
- lines changed 3, context: html, text, full: html, text
  0bba06928b53c75f8f04c13f50319650982938b8 Sat Nov 10 15:47:34 2018 -0800
  renamed new gencode table for hgnc to geneSymbol, since mouse has MGI not HGNC. Import of GENCODE mouse VM19;
src/hg/makeDb/outside/gencode/gencodeLoad.mk
- lines changed 16, context: html, text, full: html, text
  00a0d93a2032a4547ae62657fb98edd8247888ce Fri Nov 9 18:24:43 2018 -0800
  added gencode V29 final
- lines changed 24, context: html, text, full: html, text
  97ce2992da15a56f4bf44c30918586189ebed5d4 Sat Nov 10 08:00:59 2018 -0800
  fixed release data label on All GENCODE V29
- lines changed 2, context: html, text, full: html, text
  e35316da983301ef1a6fb40490a08e52333e9908 Sat Nov 10 11:34:18 2018 -0800
  import of All GENCODE v29lift37
- lines changed 15, context: html, text, full: html, text
  0bba06928b53c75f8f04c13f50319650982938b8 Sat Nov 10 15:47:34 2018 -0800
  renamed new gencode table for hgnc to geneSymbol, since mouse has MGI not HGNC. Import of GENCODE mouse VM19;
src/hg/makeDb/schema/all.joiner
- lines changed 5, context: html, text, full: html, text
  00a0d93a2032a4547ae62657fb98edd8247888ce Fri Nov 9 18:24:43 2018 -0800
  added gencode V29 final
- lines changed 91, context: html, text, full: html, text
  e35316da983301ef1a6fb40490a08e52333e9908 Sat Nov 10 11:34:18 2018 -0800
  import of All GENCODE v29lift37
- lines changed 6, context: html, text, full: html, text
  0bba06928b53c75f8f04c13f50319650982938b8 Sat Nov 10 15:47:34 2018 -0800
  renamed new gencode table for hgnc to geneSymbol, since mouse has MGI not HGNC. Import of GENCODE mouse VM19;
src/hg/makeDb/trackDb/human/hg19/trackDb.gencode.ra
- lines changed 1, context: html, text, full: html, text
  0bba06928b53c75f8f04c13f50319650982938b8 Sat Nov 10 15:47:34 2018 -0800
  renamed new gencode table for hgnc to geneSymbol, since mouse has MGI not HGNC. Import of GENCODE mouse VM19;
src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeSuper.html
- lines changed 5, context: html, text, full: html, text
  97ce2992da15a56f4bf44c30918586189ebed5d4 Sat Nov 10 08:00:59 2018 -0800
  fixed release data label on All GENCODE V29
src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeV29lift37.html
- lines changed 32, context: html, text, full: html, text
  e35316da983301ef1a6fb40490a08e52333e9908 Sat Nov 10 11:34:18 2018 -0800
  import of All GENCODE v29lift37
src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeV29lift37.ra
- lines changed 224, context: html, text, full: html, text
  e35316da983301ef1a6fb40490a08e52333e9908 Sat Nov 10 11:34:18 2018 -0800
  import of All GENCODE v29lift37
src/hg/makeDb/trackDb/human/hg38/wgEncodeGencodeV29.html
- lines changed 1, context: html, text, full: html, text
  97ce2992da15a56f4bf44c30918586189ebed5d4 Sat Nov 10 08:00:59 2018 -0800
  fixed release data label on All GENCODE V29
src/hg/makeDb/trackDb/human/hg38/wgEncodeGencodeV29.ra
- lines changed 1, context: html, text, full: html, text
  97ce2992da15a56f4bf44c30918586189ebed5d4 Sat Nov 10 08:00:59 2018 -0800
  fixed release data label on All GENCODE V29
src/hg/makeDb/trackDb/mouse/mm10/trackDb.gencode.ra
- lines changed 1, context: html, text, full: html, text
  0bba06928b53c75f8f04c13f50319650982938b8 Sat Nov 10 15:47:34 2018 -0800
  renamed new gencode table for hgnc to geneSymbol, since mouse has MGI not HGNC. Import of GENCODE mouse VM19;
src/hg/makeDb/trackDb/mouse/mm10/wgEncodeGencodeVM19.html
- lines changed 30, context: html, text, full: html, text
  0bba06928b53c75f8f04c13f50319650982938b8 Sat Nov 10 15:47:34 2018 -0800
  renamed new gencode table for hgnc to geneSymbol, since mouse has MGI not HGNC. Import of GENCODE mouse VM19;
src/hg/makeDb/trackDb/mouse/mm10/wgEncodeGencodeVM19.ra
- lines changed 286, context: html, text, full: html, text
  0bba06928b53c75f8f04c13f50319650982938b8 Sat Nov 10 15:47:34 2018 -0800
  renamed new gencode table for hgnc to geneSymbol, since mouse has MGI not HGNC. Import of GENCODE mouse VM19;
src/hg/makeDb/trackDb/tagTypes.tab
- lines changed 1, context: html, text, full: html, text
  d5fe3b53cdb1439931f37b5e87e3172472009e75 Sat Nov 10 08:09:13 2018 -0800
  added tagType entry for new GENCODE table

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