ec80006d427f1d51d2d104ab7d1192ec2b2818a5
angie
  Mon Oct 22 15:53:23 2018 -0700
Moving hgvsToVcf to userApp build, after a couple expressions of interest from external groups.

diff --git src/hg/utils/makefile src/hg/utils/makefile
index eeec513..00642d4 100644
--- src/hg/utils/makefile
+++ src/hg/utils/makefile
@@ -23,30 +23,31 @@
 	bedToPsl \
 	bedWeedOverlapping \
 	bigMafToMaf \
 	bigPslToPsl \
 	chromGraphFromBin \
 	chromGraphToBin \
 	crTreeIndexBed \
 	crTreeSearchBed \
 	gapToLift \
 	genePredFilter \
 	genePredToBigGenePred \
 	genePredToProt \
 	gff3ToGenePred \
 	gff3ToPsl \
 	gtfToGenePred \
+	hgvsToVcf \
 	hubCheck \
 	hubPublicCheck \
 	mafToBigMaf \
 	makeTableList \
 	oligoMatch \
 	overlapSelect \
 	positionalTblCheck \
 	pslToBigPsl \
 	pslMap \
 	pslMapPostChain \
 	pslRc \
 	tdbQuery \
 	transMapPslToGenePred \
 	twoBitMask
 
@@ -57,31 +58,30 @@
 	dbNsfpToBed.pl \
 	dumpDb.pl \
 	mergeOverlapBed4.pl \
 	mergeSortedBed3Plus.pl \
 	mysqlRowSizes.pl \
 	${USER_APP_SCRIPTS}
 
 APP_SCRIPTS = ${SCRIPT_FILES}
 
 # List of directories to build of interest only at UCSC
 DIRS = ${buildRefresh} \
 	automation \
 	buildReleaseLog \
 	checkUrlsInTable \
 	geoMirrorNode \
-	hgvsToVcf \
 	makeTrackIndex \
 	mysqlSecurityCheck \
 	pslFixCdsJoinGap \
 	pslMismatchGapToBed \
 	pslUniq \
 	refSeqGet \
 	safePush \
 	toDev64 \
 	vcfToHgvs \
 	wigBedToStep
 
 TEST_DIRS = \
 	genePredFilter \
 	genePredToProt \
 	gff3ToGenePred \