File Changes for galt

v374_preview to v374_preview2 (2018-10-29 to 2018-11-05) v374

• src/hg/inc/hdb.h
  • lines changed 11, context: html, text, full: html, text
    1c3d6739756883f6ac712e75eac7915a715545ef Sun Nov 4 15:03:42 2018 -0800
    Checking in new version 38 of refreshNamedSessionCustomTracks. I added the function setMinIndexLengthForTrashCleaner() to src/hg/lib/hdb.c since the trash cleaner will fail otherwise whenever you have a saved session with a custom track that is on a hub that is currently unavailable. Rather than risk losing the table in custom trash database, it needs to avoid this error and continue touching and running.
• src/hg/lib/hdb.c
  • lines changed 16, context: html, text, full: html, text
    1c3d6739756883f6ac712e75eac7915a715545ef Sun Nov 4 15:03:42 2018 -0800
    Checking in new version 38 of refreshNamedSessionCustomTracks. I added the function setMinIndexLengthForTrashCleaner() to src/hg/lib/hdb.c since the trash cleaner will fail otherwise whenever you have a saved session with a custom track that is on a hub that is currently unavailable. Rather than risk losing the table in custom trash database, it needs to avoid this error and continue touching and running.
• src/hg/utils/refreshNamedSessionCustomTracks/refreshNamedSessionCustomTracks.c
  • lines changed 33, context: html, text, full: html, text
    706db7af32b1c9847f2fa55c66f8936ef8b4936d Mon Oct 29 21:47:32 2018 -0700
    Fixing the problem with trash cleaner so that it always exits with non-zero value to indicate error clearly whenever the child process has exitCode greater than zero, gets killed by a timeout, or errAborts.
  • lines changed 8, context: html, text, full: html, text
    d0f49bd53aec0cda2217cf18ab7ebd30d2738191 Thu Nov 1 11:13:34 2018 -0700
    prefer to abort early for now rather than try to keep going. Especially this will allow error to pass up to the script that calls this.
  • lines changed 70, context: html, text, full: html, text
    ee556060739f9d32184c3fadf54ba3a14999a10c Sun Nov 4 14:13:09 2018 -0800
    Checking new version 37 of refreshNamedSessionCustomTracks. I explained importance of the program for future maintainers. I added a smaller incremental version number so that people can verify that the have the correct version, even if there are multiple versions being tested between releases. I renamed a misleading variable: childDone. I changed it to always produce exactly 10 children and split the list correctly between them. The previous version often made an extra child. By having it always produce the exact number of child forks requested, this allows the calling program to make one further verification that the program ran to completion by count the the number of messages from each child that exits normally.
  • lines changed 14, context: html, text, full: html, text
    1c3d6739756883f6ac712e75eac7915a715545ef Sun Nov 4 15:03:42 2018 -0800
    Checking in new version 38 of refreshNamedSessionCustomTracks. I added the function setMinIndexLengthForTrashCleaner() to src/hg/lib/hdb.c since the trash cleaner will fail otherwise whenever you have a saved session with a custom track that is on a hub that is currently unavailable. Rather than risk losing the table in custom trash database, it needs to avoid this error and continue touching and running.
• src/utils/gitTools/gilt
  • lines changed 2, context: html, text, full: html, text
    df7c3e757825d829e6573ce03d0559bc63327fb3 Thu Nov 1 01:57:12 2018 -0700
    fix gilt to handle wider pathnames. default 80 not long enough. do not like shorted paths with .../