Commits for hiram

v375_preview2 to v375_base (2018-12-03 to 2018-12-10) v375

790efe7b423a4e2cf4cd0f605983c3252467077f Mon Dec 3 10:51:49 2018 -0800

• eliminate duplicated section for cotJap2 lastz chainNet refs #22330
  • src/hg/makeDb/doc/mm10.txt - lines changed 79, context: html, text, full: html, text

e284f65f676b94960f0233e6deacd0cdfdfc38ed Mon Dec 3 11:08:48 2018 -0800

• correct target/query 2Bit and Sizes argument comments refs #22562
  • src/hg/utils/automation/doSameSpeciesLiftOver.pl - lines changed 2, context: html, text, full: html, text

e26231e4b8727422759359b75297e48b285306a3 Wed Dec 5 08:41:33 2018 -0800

• through the 4d estimation refs #18874
  • src/hg/makeDb/doc/galGal6/multiz77way.txt - lines changed 2572, context: html, text, full: html, text

1e8c1d53861da257cdac7eba7029c5dfc6fc8019 Fri Dec 7 15:29:28 2018 -0800

• organized by kmer counting and then phylip neighbor joining tree construction refs #22550
  • src/hg/htdocs/images/phylo/dm6_124way.png - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change shows no diff)

a4b9d8643407b8bebb0cfb06e446903a729ce75d Mon Dec 10 10:02:17 2018 -0800

• v375 final build, refs #22531
  • src/utils/qa/weeklybld/buildEnv.csh - lines changed 3, context: html, text, full: html, text

0a8766dc9b50da2cca3ee86fdb02c95bb7e9893e Mon Dec 10 10:03:02 2018 -0800

• New version number v375
  • src/hg/inc/versionInfo.h - lines changed 1, context: html, text, full: html, text
  • src/inc/srcVersion.h - lines changed 1, context: html, text, full: html, text