3aa934c99d7ce21128bebdf2d3b9055922901ec4 hiram Sat Jan 5 15:38:11 2019 -0800 mostly minor cosmetic fixups to satisify gcc-7 warnings no redmine diff --git src/utils/twoBitDup/twoBitDup.c src/utils/twoBitDup/twoBitDup.c index 858cfa2..ab5f858 100644 --- src/utils/twoBitDup/twoBitDup.c +++ src/utils/twoBitDup/twoBitDup.c @@ -1,30 +1,30 @@ /* twoBitDup - check to see if a twobit file has any identical sequences in it. */ /* Copyright (C) 2013 The Regents of the University of California * See README in this or parent directory for licensing information. */ #include "common.h" #include "linefile.h" #include "hash.h" #include "options.h" #include "twoBit.h" #include "dnaseq.h" #include "math.h" #include "udc.h" #include "md5.h" -static char const rcsid[] = "$Id: newProg.c,v 1.30 2010/03/24 21:18:33 hiram Exp $"; +// static char const rcsid[] = "$Id: newProg.c,v 1.30 2010/03/24 21:18:33 hiram Exp $"; void usage() /* Explain usage and exit. */ { errAbort( "twoBitDup - check to see if a twobit file has any identical sequences in it\n" "usage:\n" " twoBitDup file.2bit\n" "options:\n" " -keyList=file - file to write a key list, two columns: md5sum and sequenceName\n" " NOTE: use of keyList is very time expensive for 2bit files\n" " with a large number of sequences (> 5,000). Better to\n" " use a cluster run with the doIdKeys.pl automation script.\n" " -udcDir=/dir/to/cache - place to put cache for remote bigBed/bigWigs\n" "\nexample: twoBitDup -keyList=stdout db.2bit \\\n"