e37b391a14c26fd75b24710af0d70277fdd53aba kate Wed Dec 19 10:53:36 2018 -0800 Improve images. refs #22678 diff --git src/hg/htdocs/gtex.html src/hg/htdocs/gtex.html index 814a681..1c039ea 100755 --- src/hg/htdocs/gtex.html +++ src/hg/htdocs/gtex.html @@ -22,31 +22,31 @@ GTEx Laboratory, Data Analysis and Coordinating Center at the Broad Institute.

GTEx Tissue Body Map

This interactive graphic identifies the tissues sampled by GTEx for gene expression studies. Some GTEx browser tracks include the Body Map in the track configuration page, to facilitate limiting track display to tissues of interest. A stand-alone page with the interactive graphic is here.

/images/gtexBodyMapPage.svg"> + data="/images/gtexBodyMap.svg">

Credit: jwestdesign

GTEx data at UCSC

  • GTEx Gene track
  • Gene Expression in 53 tissues from GTEx RNA-seq of 8555 samples (570 donors)
  • GTEx Transcript track
  • Transcript Expression in 53 tissues from GTEx RNA-seq of 8555 samples (570 donors)
    @@ -67,25 +67,25 @@ GTEx Analysis hub
    Allele-Specific Expression in 53 Tissues from GTEx Analysis
    Distant variants affecting gene expression (trans-eQTLs) from GTEx Analysis

GTEx in the browser

Below is a screenshot of a public session that highlights the GTEx gene expression track and GTEx RNA-seq signal hub for the GTEx Resources in the Genome Browser blog article. The session shows a genomic region where 5 genes exhibit different patterns of tissue-specific expression.

-

+