4ac85cdd8e240f9ad7d07d4a72c9b61ad9f2d21c ccpowell Fri Apr 5 15:58:08 2019 -0700 Adding VM20 release to newsarch & indexNews, refs #22997 diff --git src/hg/htdocs/goldenPath/newsarch.html src/hg/htdocs/goldenPath/newsarch.html index 664f6d6..7147388 100755 --- src/hg/htdocs/goldenPath/newsarch.html +++ src/hg/htdocs/goldenPath/newsarch.html @@ -39,30 +39,48 @@ </div> <div class="col-sm-3"> <ul> <li><a href="#2004">2004 News</a></li> <li><a href="#2003">2003 News</a></li> <li><a href="#2002">2002 News</a></li> <li><a href="#2001">2001 News</a></li> </ul> </div> </div> </div> <!-- ============= 2019 archived news ============= --> <a name="2019"></a> +<a name="041019"></a> +<h2>Apr. 10, 2019 GENCODE Genes VM20 track released for mouse (GRCm38/mm10)</h2> +<p> +We are pleased to announce the release of the GENCODE Genes VM20 track for the Mouse +(<a href="../cgi-bin/hgTracks?db=mm10&position=chr12%3A56694976-56714605&hideTracks=1&knownGene=full&ignoreCookie=1" target="_blank">GRCm38/mm10</a>) +assembly. In this GENCODE Genes update, we have made the ENSMUST* IDs the default IDs and have added +the GENCODE pseudogenes to the knownGene tables. +</p> +<p> +More details about the GENCODE Genes VM20 track can be found on the +<a href="../cgi-bin/hgTrackUi?db=mm10&g=knownGene" target="_blank">GENCODE Genes track description +page</a>.</p> +<p> +We would like to thank the <a href="https://www.gencodegenes.org/" target="_blank">GENCODE +Project</a> for providing the data. The creation of this track was made possible thanks to Brian +Raney, Mark Diekhans, and Conner Powell.</p> + + <a name="032619"></a> <h2> Mar, 26 2019 New Genomenon Mastermind Variants track for Human (hg19) </h2> <p> We are pleased to announce the release of the Genomenon Mastermind Variants track for the <a href="../cgi-bin/hgTracks?db=hg19&position=chr21:33032078-33032099&hideTracks=1&varsInPubs=show&mastermind=pack&knownGene=pack&ignoreCookie=1" target="_blank">hg19/GRCh37 assembly</a>. This track is composed of variants found in full-text scientific publications collected by <a href="https://www.genomenon.com/mastermind" target="_blank">Genomenon Mastermind</a>. Mastermind uses software that searches for disease-gene-variant associations in the scientific literature to generate a commercial database. </p> <p> Genomic locations of variants are labeled with the nucleotide change (C>A) where one can hover