d5007f4b43d2ae5c833533fdba6388d8a19e81a8 ccpowell Fri Mar 22 13:20:37 2019 -0700 Editing announcement for Mastermind release, refs #21895 diff --git src/hg/htdocs/goldenPath/newsarch.html src/hg/htdocs/goldenPath/newsarch.html index 28e4e56..9a763b4 100755 --- src/hg/htdocs/goldenPath/newsarch.html +++ src/hg/htdocs/goldenPath/newsarch.html @@ -45,49 +45,48 @@
We are pleased to announce the release of the Genomenon Mastermind Variants track for the -hg19/GRCh37 assembly. This track is -composed of variants found in scientific publications collected by Genomenon Mastermind. Mastermind uses -software that searches for disease-gene-variant associations in the scientific literature. The -genome browser track shows only if a variant has been indexed by the search engine. -Genomenon Mastermind Genomic Search Engine is a commercial database of variants likely to be -mentioned in full-text scientific articles. +hg19/GRCh37 assembly. This track is +composed of variants found in full-text scientific publications collected by Genomenon Mastermind. Mastermind +uses software that searches for disease-gene-variant associations in the scientific literature to +generate a commercial database.
-Genomic locations of variants are labeled with the nucleotide change. Hover over the features to -see the gene, the amino acid change, and the support scores. All -other information is shown on the respective Mastermind variant detail page, accessible via the -"Link to Mastermind" at the top of the details page. +Genomic locations of variants are labeled with the nucleotide change (C>A) where one can hover +over the features to see the gene impacted, the specific amino acid change, and the related support +scores (SOD1:A2E - 3/3/3). By clicking an item a link titled "Protein change and link to details" +provides access to the respective Mastermind variant database page for further information. More information about this track and its display can be found on the track description page.
-We would like to give a big thank you to Mark Kiel, Steve Schwartz and Clayton Wheeler from +We would like to thank Mark Kiel, Steve Schwartz and Clayton Wheeler from Genomenon for making this data available as well as Max Haeussler, Conner Powell and the rest of the -UCSC Genome Browser team for bringing this track to life. +UCSC Genome Browser team.
We are pleased to announce the addition of GRCh38 patches to the GRCh38/hg38 database. Without a release date for the next coordinate-changing assembly, incorporating these sequences is an important step towards providing the most up to date human assembly.
This release includes new tracks visualizing patch sequences; the