7584423dc9148b9d1ca4203a3785fb471220ddea lrnassar Wed Mar 20 13:38:42 2019 -0700 Adding links to FAQgenes page from many genes track descriptions #22696 diff --git src/hg/makeDb/trackDb/ccdsGene.html src/hg/makeDb/trackDb/ccdsGene.html index 955ae7d..c6d4eb0 100644 --- src/hg/makeDb/trackDb/ccdsGene.html +++ src/hg/makeDb/trackDb/ccdsGene.html @@ -8,30 +8,34 @@ quality. The long-term goal is to support convergence towards a standard set of gene annotations on the $organism genome. </P> <P>Collaborators include: <UL> <LI><A HREF="https://www.ebi.ac.uk/" TARGET=_blank>European Bioinformatics Institute</A> (EBI) <LI><A HREF="https://www.ncbi.nlm.nih.gov" TARGET=_blank>National Center for Biotechnology Information</A> (NCBI) <LI><A HREF="http://www.cbse.ucsc.edu/" TARGET=_blank>University of California, Santa Cruz</A> (UCSC) <LI><A HREF="https://www.sanger.ac.uk/" TARGET=_blank>Wellcome Trust Sanger Institute</A> (WTSI) </UL> +<p> +For more information on the different gene tracks, see our <a target=_blank +href="/FAQ/FAQgenes.html">Genes FAQ</a>.</p> + <H2>Methods</H2> <P> CDS annotations of the $organism genome were obtained from two sources: <A HREF="https://www.ncbi.nlm.nih.gov/refseq/" TARGET=_blank>NCBI RefSeq</A> and a union of the gene annotations from <A HREF="http://www.ensembl.org/index.html" TARGET=_blank>Ensembl</A> and <A HREF="http://vega.archive.ensembl.org/index.html" TARGET=_blank>Vega</A>, collectively known as <EM>Hinxton</EM>.</P> <P> Genes with identical CDS genomic coordinates in both sets become CCDS candidates. The genes undergo a quality evaluation, which must be approved by all collaborators. The following criteria are currently used to assess each gene: <UL> <LI> an initiating ATG (Exception: a non-ATG translation start codon is