1bfad89c514f15aef219d6bfdcca6f9f754c3ac8
hiram
Fri Mar 29 15:13:56 2019 -0700
now returning DNA sequence from assembly or track hub refs #18869
diff --git src/hg/hubApi/hubApi.c src/hg/hubApi/hubApi.c
index 7213d33..18d0cc3 100644
--- src/hg/hubApi/hubApi.c
+++ src/hg/hubApi/hubApi.c
@@ -812,31 +812,31 @@
hPrintf("
genome sequences (and tracks) present in this track hub
\n");
if (NULL == genome)
{
hPrintf("odd error, can not find a gnomeList ? at url: '%s'
\n", hubTop->url);
return;
}
hPrintf("\n");
long lastTime = clock1000();
for ( ; genome; genome = genome->next )
{
++totalAssemblyCount;
if (isNotEmpty(genome->twoBitPath))
{
- hPrintf("- assembly hub %s twoBitFile: %s
\n", genome->name, genome->twoBitPath);
+ hPrintf("- assembly hub %s twoBitPath: %s
\n", genome->name, genome->twoBitPath);
char *chromName = NULL;
struct chromInfo *ci = trackHubAllChromInfo(genome->name);
unsigned chromSize = largestChromInfo(ci, &chromName);
char sizeString[64];
sprintLongWithCommas(sizeString, chromSize);
hPrintf("- %d chromosomes, largest %s at %s bases
\n", slCount(ci), chromName, sizeString);
}
if (genome->organism)
{
hPrintf("- %s - %s - %s
\n", genome->organism, genome->name, genome->description);
}
else
{ /* can there be a description when organism is empty ? */
hPrintf("- name: %s
\n", genome->name);
}