638bb4dbb5df4c892c18759d23217f9e6af2d730
kent
  Wed Mar 13 12:12:16 2019 -0700
Adding some missing newlines to status message.

diff --git src/hg/cirm/cdw/cdwMakePairedEndQa/cdwMakePairedEndQa.c src/hg/cirm/cdw/cdwMakePairedEndQa/cdwMakePairedEndQa.c
index 4d50385..9c60e93 100644
--- src/hg/cirm/cdw/cdwMakePairedEndQa/cdwMakePairedEndQa.c
+++ src/hg/cirm/cdw/cdwMakePairedEndQa/cdwMakePairedEndQa.c
@@ -214,36 +214,36 @@
 if (!keepTemp) {
     remove(sampleFastqName1);
     remove(sampleFastqName2);
 }
 cdwFastqFileFree(&fqf1);
 cdwFastqFileFree(&fqf2);
 }
 
 void pairedEndQa(struct sqlConnection *conn, struct cdwFile *ef, struct cdwValidFile *vf)
 /* Look for other end,  do a pairwise alignment, and save results in database. */
 {
 verbose(2, "pairedEndQa on %u %s %s\n", ef->id, ef->cdwFileName, ef->submitFileName);
 /* Get other end, return if not found. */
 struct cdwValidFile *otherVf = cdwOppositePairedEnd(conn, ef, vf);
 if (otherVf == NULL) {
-    verbose(1, "no opposite paired end file found");
+    verbose(1, "no opposite paired end file found\n");
     return;
     }
 
 if (otherVf->fileId > vf->fileId) {
-    verbose(1, "this is not the first file of the pair");
+    verbose(1, "this is not the first file of the pair\n");
     return;
     }
 
 struct cdwValidFile *vf1, *vf2;
 struct cdwQaPairedEndFastq *pair = cdwQaPairedEndFastqFromVfs(conn, vf, otherVf, &vf1, &vf2);
 if (pair != NULL)
     {
     verbose(1, "pair has already been processed\n");
     cdwValidFileFree(&otherVf);
     return;
     }
 /* Get target assembly and figure out path for BWA index. */
 struct cdwAssembly *assembly = cdwAssemblyForUcscDb(conn, vf->ucscDb);
 assert(assembly != NULL);
 char genoFile[PATH_LEN];