0222476b54fcfb70acb694f9819c9fbcbbeea7f8
hiram
  Tue Apr 9 08:31:05 2019 -0700
adding supported type rmsk refs #18869

diff --git src/hg/hubApi/tests/makefile src/hg/hubApi/tests/makefile
index 24cf005..998b1db 100644
--- src/hg/hubApi/tests/makefile
+++ src/hg/hubApi/tests/makefile
@@ -1,19 +1,19 @@
 
 test::	test0 test1 test2 test3 test4 test5 test6 test7 test8 test9 test10 \
 	test11 test12 test13 test14 test15 test16 test17 test18 test19 test20 \
-	test21 test22 test23 test24 test25
+	test21 test22 test23 test24 test25 test26 test27 test28
 
 setOutput:
 	@if [ ! -d testOutput ]; then mkdir testOutput; fi
 
 clean::
 	rm -f testOutput/*.gz
 	rmdir testOutput
 
 # exclude these lines from the JSON output for comparison with expected
 excludeLines = downloadTime|dataTime
 
 # testing /list/noSubCommand, /list/publicHubs and /list/ucscGenomes
 test0: setOutput
 	@./jsonConsumer.pl -test0 | egrep -v "${excludeLines}" | gzip -c > testOutput/$@.gz
 	@zdiff expected/$@.gz testOutput/$@.gz
@@ -136,15 +136,33 @@
 
 # testing /list/chromosomes? hubUrl genome=_araTha1 track=assembly_
 test23: setOutput
 	@./jsonConsumer.pl -endpoint="/list/chromosomes" -hubUrl="http://genome-test.gi.ucsc.edu/~hiram/hubs/Plants/hub.txt" -genome="_araTha1" -track="assembly_" | egrep -v "${excludeLines}" | gzip -c > testOutput/$@.gz
 	@zdiff expected/$@.gz testOutput/$@.gz
 
 # testing /getData/sequence? hubUrl genome=hg19&chrom=chrCp&start=4321&end=5647
 test24: setOutput
 	@./jsonConsumer.pl -endpoint="/getData/sequence" -hubUrl="http://genome-test.gi.ucsc.edu/~hiram/hubs/Plants/hub.txt" -genome="_araTha1" -chrom="chrCp" -start=4321 -end=5678 | egrep -v "${excludeLines}" | gzip -c > testOutput/$@.gz
 	@zdiff expected/$@.gz testOutput/$@.gz
 
 # testing /getData/sequence? hubUrl Bejerano genome=hg19&chrom=chrM&start=4321&end=5647
 test25: setOutput
 	@./jsonConsumer.pl -endpoint="/getData/sequence" -hubUrl="http://genome-test.gi.ucsc.edu/~hiram/hubs/GillBejerano/hub.txt" -genome="hg19" -chrom="chrM" -start=4321 -end=5678 | egrep -v "${excludeLines}" | gzip -c > testOutput/$@.gz
 	@zdiff expected/$@.gz testOutput/$@.gz
+
+# testing genePred track
+#    /getData/track?db=ce11&chrom=chrV&track=refGene&start=5231045&end=5241045
+test26: setOutput
+	@./jsonConsumer.pl -endpoint="/getData/track" -db="ce11" -track="refGene"  -chrom="chrV" -start=5231045 -end=5241045 | egrep -v "${excludeLines}" | gzip -c > testOutput/$@.gz
+	@zdiff expected/$@.gz testOutput/$@.gz
+
+# testing PSL track
+#    /getData/track?db=ce11&chrom=chrV&track=ncbiRefSeqPsl&start=5231045&end=5241045
+test27: setOutput
+	@./jsonConsumer.pl -endpoint="/getData/track" -db="ce11" -track="ncbiRefSeqPsl"  -chrom="chrV" -start=5231045 -end=5241045 | egrep -v "${excludeLines}" | gzip -c > testOutput/$@.gz
+	@zdiff expected/$@.gz testOutput/$@.gz
+
+# testing RMSK track
+#    /getData/track?db=ce11&debug=0&chrom=chrV&track=rmsk&start=5231045&end=5241045
+test28: setOutput
+	@./jsonConsumer.pl -endpoint="/getData/track" -db="ce11" -track="rmsk"  -chrom="chrV" -start=5231045 -end=5241045 | egrep -v "${excludeLines}" | gzip -c > testOutput/$@.gz
+	@zdiff expected/$@.gz testOutput/$@.gz