fe3ea6f0a43b7dcfe2ea05a13c8a053be2ca793d
jnavarr5
Fri Apr 12 14:23:10 2019 -0700
Adding TCP examples for hgdownload-euro on the GBiC help page, refs #20551
diff --git src/hg/htdocs/goldenPath/help/gbic.html src/hg/htdocs/goldenPath/help/gbic.html
index 3656deb..7324445 100755
--- src/hg/htdocs/goldenPath/help/gbic.html
+++ src/hg/htdocs/goldenPath/help/gbic.html
@@ -113,38 +113,42 @@
set up in Germany for users in Europe. You can change the /usr/local/apache/cgi-bin/hg.conf
genome-mysql.soe.ucsc.edu lines to genome-euro-mysql.soe.ucsc.edu in order to get better
performance. You can then use the program to download
assemblies of interest to your local Genome Browser, which will result in performance at least
as fast as the UCSC site.
Your network firewall must allow outgoing connections to the following servers and ports:
The first argument of the program is called command
in the following section of this document.
The first command that you will need is install
, which installs the Genome Browser dependencies,
binary files and basic MySQL infrastructure:
sudo bash browserSetup.sh install
There are a number of options supported by the GBiC program. In all cases, options must be specified before the command.