b64eb6ca5ab75aa1700fbd9f4c8eec922c6a137b jnavarr5 Wed Apr 10 09:59:35 2019 -0700 Updating http to https and adding a port number to the Berkeley Drosophila transcription network project site for dm3, uiLinks cronjob. diff --git src/hg/makeDb/trackDb/drosophila/bdtnpChipperOld.html src/hg/makeDb/trackDb/drosophila/bdtnpChipperOld.html index f314e7b..8594b7c 100644 --- src/hg/makeDb/trackDb/drosophila/bdtnpChipperOld.html +++ src/hg/makeDb/trackDb/drosophila/bdtnpChipperOld.html @@ -143,33 +143,33 @@ The symmetric null method assumes that the background window score distribution is symmetric about its mean, and estimates the distribution from values less than the observed mode. This estimated null distribution was used to assign p-values to each window score, and these were corrected for multiple testing to control the FDR. A separate FDR estimation method that uses the IgG control data to estimate the null distribution defines a similar number of bound regions (not shown here, see Li et al., 2008).

Credits

Thanks to the -Berkeley Drosophila +Berkeley Drosophila Transcription Network Project's -In Vivo DNA Binding collaboration, and Stewart MacArthur and Mark Biggin in particular, for these data.

References

Li XY, MacArthur S, Bourgon R, Nix D, Pollard DA, Iyer VN, Hechmer A, Simirenko L, Stapleton M, Luengo Hendriks CL et al. Transcription factors bind thousands of active and inactive regions in the Drosophila blastoderm. PLoS Biol. 2008 Feb;6(2):e27. PMID: 18271625; PMC: PMC2235902