2684e0a854bfa1e8aa0076eca78167e64f62c4fc braney Wed Apr 17 11:00:50 2019 -0700 change confusing descriptions of cdsStartStat and cdsEndStat to something more descriptive diff --git src/hg/lib/ensGene.as src/hg/lib/ensGene.as index f720f14..05dd5a2 100644 --- src/hg/lib/ensGene.as +++ src/hg/lib/ensGene.as @@ -1,19 +1,19 @@ table ensGene "Ensembl gene predictions." ( string name; "Ensembl transcript ID" string chrom; "Reference sequence chromosome or scaffold" char[1] strand; "+ or - for strand" uint txStart; "Transcription start position (or end position for minus strand item)" uint txEnd; "Transcription end position (or start position for minus strand item)" uint cdsStart; "Coding region start (or end position for minus strand item)" uint cdsEnd; "Coding region end (or start position for minus strand item)" uint exonCount; "Number of exons" uint[exonCount] exonStarts; "Exon start positions (or end positions for minus strand item)" uint[exonCount] exonEnds; "Exon end positions (or start positions for minus strand item)" uint score; "always 0 for Ensembl genes" string name2; "Ensembl gene ID" - string cdsStartStat; "enum('none','unk','incmpl','cmpl')" - string cdsEndStat; "enum('none','unk','incmpl','cmpl')" + string cdsStartStat; "Status of CDS start annotation (none, unknown, incomplete, or complete)" + string cdsEndStat; "Status of CDS end annotation (none, unknown, incomplete, or complete)" int[exonCount] exonFrames; "Exon frame {0,1,2}, or -1 if no frame for exon" )