8999273deebb9514bab0282c96011acb4355ecbd angie Fri May 17 13:25:31 2019 -0700 Simplifying hgVai documentation disclaimer that it's not for medical use. diff --git src/hg/htdocs/goldenPath/help/hgVaiHelpText.html src/hg/htdocs/goldenPath/help/hgVaiHelpText.html index 1be1752..74941d8 100755 --- src/hg/htdocs/goldenPath/help/hgVaiHelpText.html +++ src/hg/htdocs/goldenPath/help/hgVaiHelpText.html @@ -14,32 +14,31 @@ types of relevant information: the dbSNP identifier if the variant is found in <A HREF="https://www.ncbi.nlm.nih.gov/projects/SNP/" TARGET=_BLANK>dbSNP</A>, protein damage scores for missense variants from the <A HREF="https://sites.google.com/site/jpopgen/dbNSFP" TARGET=_BLANK>Database of Non-synonymous Functional Predictions (dbNSFP)</A>, and conservation scores computed from multi-species alignments. The VAI can optionally filter results to retain only specific functional effect categories, variant properties and multi-species conservation status. </P> <div class='warn-note' style='border: 2px solid #9e5900; padding: 5px 20px; background-color: #ffe9cc;'> <p><span style='font-weight: bold; color: #c70000;'>NOTE:</span><br> -The VAI is only a research tool, meant to be used by those who have been -properly trained in the interpretation of genetic data, +The VAI is only a research tool and should never be used to make any kind of medical decision. We urge users seeking information about a personal medical or genetic condition to consult with a qualified physician for diagnosis and for answers to personal questions. </p></div><BR> <a name="variantCalls"></a> <h2>Submitting your variant calls</h2> <P> In order to use the VAI, you must provide variant calls in either the <A HREF="../../FAQ/FAQformat.html#format10" TARGET=_BLANK>Personal Genome SNP (pgSnp)</A> or <A HREF="../help/vcf.html" TARGET=_BLANK>VCF</A> format. pgSnp-formatted variants may be uploaded as a <A HREF="../help/hgTracksHelp.html#CustomTracks" TARGET=_BLANK>Custom Track</A>.