61b98e84a58f8049465452e435fa9b6048777bf5
kate
  Thu May 16 11:52:43 2019 -0700
Add track tables for ENCODE 3 TFBS Clusters track. refs #21139

diff --git src/hg/makeDb/schema/all.joiner src/hg/makeDb/schema/all.joiner
index 6803090..0e29e9d 100644
--- src/hg/makeDb/schema/all.joiner
+++ src/hg/makeDb/schema/all.joiner
@@ -7232,34 +7232,46 @@
 identifier dnaseClusterSourceId
 "Numeric index of cell type contributing to a DNAse cluster"
     $hg.wgEncodeRegDnaseClusteredSources.id
     hg19.wgEncodeRegDnaseClusteredV3.sourceIds comma full
     hg38.wgEncodeRegDnaseClustered.sourceIds comma full
 
 identifier peptideAtlasAccession external=PeptideAtlas
 "Peptide accession from peptideatlas.org"
     hgFixed.peptideAtlas2014Peptides.accession
     hg19.peptideAtlas2014.name
 
 # Transcription Factor and TF Motif track info
 
 identifier txnFactorGeneId
 "Transcription factor gene name (for human, HGNC)"
-    hg19.wgEncodeRegTfbsClusteredV3.name dupeOk
-    # note: these could be in hgFixed or other non-assembly db
-    hg19.factorbookMotifCanonical.target
-    hg19.factorbookGeneAlias.name minCheck=0.85
+    hg19,hg38.encRegTfbsClustered.name dupeOk
+    hg19.wgEncodeRegTfbsClusteredV3.name
+    hg19.wgEncodeRegClusteredInputsV3.factor
+    hg19,hg38.encRegTfbsClusteredInputs.factor
+    hg19,hg38.factorbookMotifCanonical.target minCheck=.75
+    hg19,hg38.factorbookGeneAlias.name minCheck=0.75
+
+identifier txnFactorClusterSourceId
+"Numeric id of a source contributing to a TFBS cluster"
+    hg19,hg38.encRegTfbsClusteredSources.id
+    hg19,hg38.encRegTfbsClustered.sourceIds comma
+
+identifier txnFactorClusterInputId
+"Identifier of a source contributing to a TFBS cluster"
+    hg19,hg38.encRegTfbsClusteredSources.description
+    hg19,hg38.encRegTfbsClusteredInputs.source
 
 identifier txnFactorMotifId
 "Transcription factor motif name/id"
     hg19.factorbookMotifPos.name dupeOk
     hg19.factorbookMotifPwm.name minCheck=0.85
     hg19.factorbookMotifCanonical.motif comma minCheck=0.85
 
 identifier ncbiGene
 "Genes on Ebola virus from genbank records"
     $eboVir,$staAur.ncbiGene.chrom dupeOk
     $eboVir.chromInfo.chrom
     $staAur.chromInfo.chrom
 
 identifier ncbiGeneDesc
 "Genes descriptions on Staph bacteria from genbank records"