c1072a276744b6c58f7f88b997c17eb6da489616 max Wed May 15 07:38:12 2019 -0700 another update to the clinvar docs page, no redmine diff --git src/hg/makeDb/trackDb/human/clinvar.html src/hg/makeDb/trackDb/human/clinvar.html index 74938c5..6e32713 100644 --- src/hg/makeDb/trackDb/human/clinvar.html +++ src/hg/makeDb/trackDb/human/clinvar.html @@ -52,31 +52,32 @@

Entries in the ClinVar short variants track are shaded by clinical annotation: red for pathogenic, dark grey for uncertain significance or not provided and green for benign.

The score of the variants is the number of "stars" in ClinVar. On the track configuration page (above), you can filter the track to show only variants with more than a certain number of stars. For more information on the star rating, see the ClinVar documentation.

Data updates

ClinVar publishes a new release once per month and this track is updated automatically 5-6 days -later. You can find the previous versions of the track organized by month on our +later. The date of the last update is shown when you click onto any variant. +You can find the previous versions of the track organized by month on our downloads server in the archive directory. To access one of these previous versions, paste the URL to one of the older files into our "Custom tracks" box.

Data access

The raw data can be explored interactively with the Table Browser or the Data Integrator.

For automated download and analysis, the genome annotation is stored in a bigBed file that can be downloaded from our download server. The files for this track are called clinVarMain.bb and clinVarCnv.bb. Individual