8185d6095db9c89a6ca7c9003545f6b476998d57
ccpowell
Fri May 3 13:50:55 2019 -0700
Changing
to for the image sections of hgWiggle, refs #23396
diff --git src/hg/htdocs/goldenPath/help/hgWiggleTrackHelp.html src/hg/htdocs/goldenPath/help/hgWiggleTrackHelp.html
index 282c654..65c01c0 100755
--- src/hg/htdocs/goldenPath/help/hgWiggleTrackHelp.html
+++ src/hg/htdocs/goldenPath/help/hgWiggleTrackHelp.html
@@ -73,84 +73,82 @@
smoothing window of 16 pixels.
Draw indicator lines (boxed in orange):
-
at y=0.0: Select the "ON" setting to display a line marking the 0.0
position on the graph (default is "OFF").
-
at y= : Select the "ON" setting to display a line on the graph at
the specified numerical value (defaults are "0" and "OFF"). This line can be
used to mark a significant threshold on the graph. For example, in the image below,
y=3.
-
When you have finished making your configuration changes, click the Apply button to preview
your changes, or click the Submit button to return
to the annotation track display page.
Annotation track display modes
Each annotation track within the window may have up to five display modes:
-
- -
- Dense: the track is displayed with all features collapsed into a single line.
+
+ - Dense
+ - the track is displayed with all features collapsed into a single line.
The darker the line color the greater the wiggle value at that location.
-
-
- -
- Squish: the track is displayed with all the features collapsed into a single
+
+
+ - Squish
+ - the track is displayed with all the features collapsed into a single
line, much like the dense display mode with greater compression.
-
- -
- Pack: the track displays the wiggle value associated with each annotation
- feature creating a histogram-like image, much like the dense display mode with greater compression.
+
+ - Pack:/dt>
+
- the track displays the wiggle value associated with each annotation feature creating a
+ histogram-like image, much like the dense display mode with greater compression.
-
- -
- Full: the track displays the wiggle value associated with each annotation
- feature creating a histogram-like image.
+
+ - Full
+ - the track displays the wiggle value associated with each annotation feature creating a
+ histogram-like image.
-
-
- -
- Hide: the track is not displayed at all. To hide all the annotation tracks, click
- the hide all button.
-
-
-
+
+ - Hide
+ - the track is not displayed at all. To hide all the annotation tracks, click
+ the hide all button.
+
Overlay method
Note that not all graph-based tracks include the Overlay options.
-
- -
- Transparent: This setting displays the colored
+
+ - Transparent
+ - This setting displays the colored
transparent graphs of multiple subtracks overlayed in the same vertical space.
-
- -
- Solid: This setting displays the colored opaque graphs of multiple subtracks
+
+
- Solid
+ - This setting displays the colored opaque graphs of multiple subtracks
overlayed in the same vertical space.
-
- -
- Stacked: This setting displays each graph stacked on top of each other where the
+
+
- Stacked
+ - This setting displays each graph stacked on top of each other where the
high point of the graph is the sum of all the values.
-
- None: This setting displays each graph in its own vertical space.
- 
-
+
+ - None
+ - This setting displays each graph in its own vertical space.
+
+
+