b4ed5e2397d26437a76fee1360d2534668aac013 jnavarr5 Fri May 3 13:42:10 2019 -0700 Adding hgdownload-euro rsync and ftp examples, refs #20551 diff --git src/hg/htdocs/FAQ/FAQdownloads.html src/hg/htdocs/FAQ/FAQdownloads.html index 8a3ec86..dceb8f5 100755 --- src/hg/htdocs/FAQ/FAQdownloads.html +++ src/hg/htdocs/FAQ/FAQdownloads.html @@ -68,30 +68,31 @@ You can also download data from our Downloads page or our DAS server. To download a specific subset of the data or to configure the output format of the data, use the Table Browser. For information on extracting a large set of sequences from an assembly, see Extracting sequence in batch from an assembly.
For more information on using the UCSC DAS server, see Downloading data from the UCSC DAS server.
To quickly download large volumes of data you can use UDR (UDT Enabled Rysnc): UDR provides users much faster download rates. Here is an example using UDR, once installed, to download all the mouse mm9 ENCODE information that amounts to several terabytes:
$ udr rsync -avP hgdownload.soe.ucsc.edu::goldenPath/mm9/encodeDCC/ /my/local/mm9/
+$ udr rsync -avP hgdownload-euro.soe.ucsc.edu::goldenPath/mm9/encodeDCC/ /my/local/mm9/
Please read more about the new UDR method here.
As of June 2016, the location of metadata tables that support the GenBank and RefSeq tracks (RefSeq, Other RefSeq, mRNA, EST, etc.) have been moved from directories of individual assemblies to one global database, hgFixed.
The tables below (previously found per assembly) can now be downloaded from the hgFixed database: