b4ed5e2397d26437a76fee1360d2534668aac013 jnavarr5 Fri May 3 13:42:10 2019 -0700 Adding hgdownload-euro rsync and ftp examples, refs #20551 diff --git src/hg/htdocs/goldenPath/help/ftp.html src/hg/htdocs/goldenPath/help/ftp.html index 9e89a8d..0498866 100755 --- src/hg/htdocs/goldenPath/help/ftp.html +++ src/hg/htdocs/goldenPath/help/ftp.html @@ -1,38 +1,41 @@ <!DOCTYPE html> <!--#set var="TITLE" value="Genome Browser Data Downloads" --> <!--#set var="ROOT" value="../.." --> <!-- Relative paths to support mirror sites with non-standard GB docs install --> <!--#include virtual="$ROOT/inc/gbPageStart.html" --> <h1>Downloading data</h1> <h2>Rsync (recommended method)</h2> <p> We recommend that you download data via rsync using the command line, especially for large -files.</p> +files using the North American or European download servers.</p> <p> For example, when downloading ENCODE files to your present directory (./), use an expression such as:</p> -<pre><code>$ rsync -a -P rsync://hgdownload.soe.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeDir/wgEncodeFile ./</code></pre> +<pre><code>rsync -a -P rsync://hgdownload.soe.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeDir/wgEncodeFile ./</code></pre> +<pre><code>rsync -a -P rsync://hgdownload-euro.soe.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeDir/wgEncodeFile ./</code></pre> <p> To download the entire directory (note the trailing slash), use an expression such as:</p> -<pre><code>$ rsync -a -P rsync://hgdownload.soe.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeDir/ ./</code></pre> +<pre><code>rsync -a -P rsync://hgdownload.soe.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeDir/ ./</code></pre> +<pre><code>rsync -a -P rsync://hgdownload-euro.soe.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeDir/ ./</code></pre> <p> To obtain a file's location (URL) to use with -rsync (<em>rsync://hgdownload.soe.ucsc.edu/...</em>), navigate in your browser to our FTP site at +rsync (<em>rsync://hgdownload.soe.ucsc.edu/...</em> or +<em>rsync://hgdownload-euro.soe.ucsc.edu/...</em>), navigate in your browser to our FTP site at <a href="ftp://hgdownload.soe.ucsc.edu/" target="_blank">ftp://hgdownload.soe.ucsc.edu/</a> or our downloads page at <a href="http://hgdownload.soe.ucsc.edu/" target="_blank">http://hgdownload.soe.ucsc.edu/downloads.html</a>, and look for your file of interest. To learn more about rsync's options, type "man rsync" on the command line.</p> <h2>Downloading from a web browser</h2> <p> If you are not comfortable using the command line, you can download your file via FTP in your browser at <a href="ftp://hgdownload.soe.ucsc.edu/goldenPath" target="_blank">ftp://hgdownload.soe.ucsc.edu/goldenPath</a>, or from our downloads page at <a href="http://hgdownload.soe.ucsc.edu/" target="_blank">http://hgdownload.soe.ucsc.edu/downloads.html</a>.</p> <p> However, downloading via your browser will be very slow or may even time out for large files (i.e., bigBed, bigWig, BAM, VCF, etc.). Also, Safari does not support FTP inside the browser. When you