50c0049649c7268bd12ab0689cda7f8261b46a63
chmalee
  Mon May 6 16:11:42 2019 -0700
DGV Gold track mostly ready for QA, refs #23371

diff --git src/hg/utils/automation/translateDgvGold.py src/hg/utils/automation/translateDgvGold.py
index 9e72afc..c412ff3 100755
--- src/hg/utils/automation/translateDgvGold.py
+++ src/hg/utils/automation/translateDgvGold.py
@@ -41,31 +41,31 @@
     extraString = "\t".join(info)
 
     if doHeader:
         global header
         extraHeader.remove("Name")
         extraHeader.remove("outer_start")
         extraHeader.remove("inner_start")
         extraHeader.remove("inner_end")
         extraHeader.remove("outer_end")
         header += "\t" + "\t".join(extraHeader)
 
     return name, subType, outerStart, innerStart, innerEnd, outerEnd, extraString
 
 ### main ###
 
-if len(sys.argv) != 1:
+if len(sys.argv) != 2:
     print("Usage: translateDgvGold.py input.gff | sort -k1,1 -k2,2n | uniq > out.bed12\n"\
             "\nWrites a bed12 to stdout.\n")
     sys.exit(1)
 
 doHeader = True
 
 for line in open(sys.argv[1]):
     gffFields = line.strip().split("\t")
     extraInfo = gffFields[8].split(";")
     chrom = gffFields[0]
     name, subType, outerStart, innerStart, innerEnd, chromEnd, extraString = parseExtraInfo(extraInfo, doHeader)
     if subType not in colors:
         sys.exit("CNV subtype: %s not recognized.\n" % subType)
 
     chromStart = str(int(outerStart) - 1)