7466895f92735f9a050b7080214195124b37e226 braney Wed Jun 5 17:32:18 2019 -0700 add fixStepToBedGraph.pl and varStepToBedGraph.pl to build so they'll appear in userApps diff --git src/hg/makeDb/hgLoadWiggle/makefile src/hg/makeDb/hgLoadWiggle/makefile index bd5218d..837ff60 100644 --- src/hg/makeDb/hgLoadWiggle/makefile +++ src/hg/makeDb/hgLoadWiggle/makefile @@ -1,50 +1,56 @@ kentSrc = ../../.. include ../../../inc/common.mk L += -lm ${MYSQLLIBS} MYLIBDIR = ../../../lib/${MACHTYPE} MYLIBS = ${MYLIBDIR}/jkhgap.a ${MYLIBDIR}/jkweb.a O = hgLoadWiggle.o A = hgLoadWiggle -all:: ${A} hgWiggle wigEncode +all:: ${A} hgWiggle wigEncode fixStepToBedGraph varStepToBedGraph hgLoadWiggle: $O ${MYLIBS} ${CC} -o ${DESTDIR}${BINDIR}/${A}${EXE} $O ${MYLIBS} $L ${STRIP} ${DESTDIR}${BINDIR}/${A}${EXE} hgDumpWiggle: hgDumpWiggle.o ${MYLIBS} ${CC} -o ${DESTDIR}${BINDIR}/hgDumpWiggle${EXE} hgDumpWiggle.o \ ${MYLIBS} $L ${STRIP} ${DESTDIR}${BINDIR}/hgDumpWiggle${EXE} hgWiggle: hgWiggle.o ${MYLIBS} ${CC} -o ${DESTDIR}${BINDIR}/hgWiggle${EXE} hgWiggle.o \ ${MYLIBS} $L ${STRIP} ${DESTDIR}${BINDIR}/hgWiggle${EXE} hgWiggle.o: ../../inc/wiggle.h hgWiggle.c wigEncode: wigEncode.o ${MYLIBS} ${CC} -o ${DESTDIR}${BINDIR}/wigEncode${EXE} wigEncode.o ${MYLIBS} $L ${STRIP} ${DESTDIR}${BINDIR}/wigEncode${EXE} wigEncode.o: ../../inc/wiggle.h wigEncode.c +varStepToBedGraph: varStepToBedGraph.pl + rm -f "${DESTDIR}${BINDIR}/$@.pl" && cp $@.pl "${DESTDIR}${BINDIR}" && chmod +x "${DESTDIR}${BINDIR}/$@.pl" + +fixStepToBedGraph: fixStepToBedGraph.pl + rm -f "${DESTDIR}${BINDIR}/$@.pl" && cp $@.pl "${DESTDIR}${BINDIR}" && chmod +x "${DESTDIR}${BINDIR}/$@.pl" + compile: ${O} hgWiggle.o wigEncode.o ${MYLIBS} ${CC} -o ${A} $O ${MYLIBS} $L ${CC} -o hgWiggle hgWiggle.o ${MYLIBS} $L ${CC} -o wigEncode wigEncode.o ${MYLIBS} $L test: cd tests && ./RunTest.sh test_verbose: cd tests && ./RunTest.sh -verbose install_tests:: rm -f ${SCRIPTS}/chkWiggleTable.sh cp -p chkWiggleTable.sh ${SCRIPTS} rm -f ${SCRIPTS}/varStepToBedGraph.pl