6254a2f3273acb0889ba875ffab273f0099cea16 galt Tue May 21 00:17:23 2019 -0700 Fixe problems found by htmlCheck validate and hgNearTest robot diff --git src/hg/makeDb/trackDb/human/encTfChipPk.html src/hg/makeDb/trackDb/human/encTfChipPk.html index f29550b..b35b4f0 100644 --- src/hg/makeDb/trackDb/human/encTfChipPk.html +++ src/hg/makeDb/trackDb/human/encTfChipPk.html @@ -1,20 +1,20 @@ <h2>Description</h2> <p> This track represents a comprehensive set of human transcription factor binding sites based on ChIP-seq experiments generated by production groups in the ENCODE Consortium between -February 2011 and November 2018.</> +February 2011 and November 2018.</p> <p> Transcription factors (TFs) are proteins that bind to DNA and interact with RNA polymerases to regulate gene expression. Some TFs contain a DNA binding domain and can bind directly to specific short DNA sequences ('motifs'); others bind to DNA indirectly through interactions with TFs containing a DNA binding domain. High-throughput antibody capture and sequencing methods (e.g. chromatin immunoprecipitation followed by sequencing, or 'ChIP-seq') can be used to identify regions of TF binding genome-wide. These regions are commonly called ChIP-seq peaks.</p> The related <i>Transcription Factor ChIP-seq Clusters</i> tracks (<a target="_blank" href="../cgi-bin/hgTrackUi?db=hg19&g=encRegTfbsClustered">hg19</a>, <a target="_blank" href="../cgi-bin/hgTrackUi?db=hg19&g=encRegTfbsClustered">hg38</a>) provide summary views of this data. </p> @@ -99,21 +99,21 @@ </p> <p> Wang J, Zhuang J, Iyer S, Lin XY, Greven MC, Kim BH, Moore J, Pierce BG, Dong X, Virgil D <em>et al</em>. <a href="https://academic.oup.com/nar/article/41/D1/D171/1069417" target="_blank"> Factorbook.org: a Wiki-based database for transcription factor-binding data generated by the ENCODE consortium</a>. <em>Nucleic Acids Res</em>. 2013 Jan;41(Database issue):D171-6. PMID: <a href="https://www.ncbi.nlm.nih.gov/pubmed/23203885" target="_blank">23203885</a>; PMC: <a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3531197/" target="_blank">PMC3531197</a> </p> <H2> Data Use Policy </H2> <P> <B>Users may freely download, analyze and publish results based on any ENCODE data without restrictions.</B> -Researchers using unpublished ENCODE data are encouraged to contact the data producers to discuss possible coordinated publications; however, this is optional. </> +Researchers using unpublished ENCODE data are encouraged to contact the data producers to discuss possible coordinated publications; however, this is optional. </p> <p> <B><I>Users of ENCODE datasets are requested to cite the ENCODE Consortium and ENCODE production laboratory(s) that generated the datasets used, as described in <A target="_blank" href="https://www.encodeproject.org/help/citing-encode/">Citing ENCODE</A>.</B></I></p>