6254a2f3273acb0889ba875ffab273f0099cea16 galt Tue May 21 00:17:23 2019 -0700 Fixe problems found by htmlCheck validate and hgNearTest robot diff --git src/hg/makeDb/trackDb/human/encodeYaleChIPSTAT1Sig.html src/hg/makeDb/trackDb/human/encodeYaleChIPSTAT1Sig.html index cf7e136..f35aae4 100644 --- src/hg/makeDb/trackDb/human/encodeYaleChIPSTAT1Sig.html +++ src/hg/makeDb/trackDb/human/encodeYaleChIPSTAT1Sig.html @@ -1,30 +1,30 @@ <H2>Description</H2> <P> Each of these four tracks shows the map of signal intensity (estimating the fold enrichment [log2 scale] of ChIP DNA vs unstimulated DNA) for STAT1 ChIP-chip using Human Hela S3 cells hybridized to four different array designs/platforms. The first three platforms are custom maskless photolithographic arrays with oligonucleotides tiling most of the non-repetitive DNA sequence of the ENCODE regions: <UL> <LI>Maskless design #1: 50-mer oligonucleotides tiled every 38 bps (overlapping by 12 nts) <LI>Maskless design #2: 36-mer oligonucleotides tiled end to end <LI>Maskless design #3: 50-mer oligonucleotides tiled end to end -</UL></P +</UL></P> <P> The fourth array platform is an ENCODE PCR Amplicon array manufactured by Bing Ren's lab at UCSD. </P> <P> Each track shows the combined results of multiple biological replicates: five for the first maskless array (50-mer every 38 bp), two for the second maskless array (36-mer every 36 bp), three for the third maskless array (50-mer every 50 bp) and six for the PCR Amplicon array. For all arrays, the STAT1 ChIP DNA was labeled with Cy5 and the control DNA was labeled with Cy3.</P> <P> These data are available at NCBI GEO as <A HREF="https://www.ncbi.nlm.nih.gov/projects/geo/query/acc.cgi?acc= GSE2714" TARGET=_blank>GSE2714</A>, which also provides additional information about