7c374ad903a137e9800c1e08acc0b1da357971dc
max
  Thu May 23 06:49:48 2019 -0700
adding tdbSort and tdbRename to user apps, suggested by Kate, no redmine

diff --git src/utils/makefile src/utils/makefile
index 0d338f4..e421ea7 100644
--- src/utils/makefile
+++ src/utils/makefile
@@ -130,38 +130,40 @@
 	jkUniq \
 	lineCount \
 	nt4Frag \
 	pslToXa \
 	scaffoldFaToAgp \
 	scrambleFa \
 	subs \
 	tableSum \
 	textHist2 \
 	udcCleanup \
 	undupFa \
 	upper \
 	venn \
 	verticalSplitSqlTable \
 	weedLines \
-	wigTestMaker
+
 
 # list of scripts to install
 
 USER_APP_SCRIPTS = \
 	bedJoinTabOffset \
 	expMatrixToBarchartBed \
 	ucscApiClient \
+	tdbRename \
+	tdbSort \
 	webSync
 
 SCRIPT_FILES = \
 	agpToLift \
 	apacheLogParse \
 	bedCollapse.pl \
 	bedFixBlockOverlaps \
 	bedOverlapMerge \
 	bedSingleCover.pl \
 	bedBetween \
 	doLocusName \
 	extToolsChromeParse \
 	iSync \
 	lodToBedScore \
 	matrixMerge \
@@ -175,32 +177,31 @@
 	ggTables \
 	ggGeneClasses \
 	ggGpmlToTab \
 	ggKgmlToTab \
 	ggMsrToTab \
 	ggPidToTab \
 	ggPpiToTab \
 	ggSpfToTab \
 	bedNamePickFirst \
 	bedBestTranscript \
 	genePredToBed \
 	cgiSmokeTest \
 	phegenToBed \
 	doLocusName \
 	cancerMafToBigBed \
-	tdbRename \
-	tdbSort \
+	pq \
 	${USER_APP_SCRIPTS}
 
 # List of all directories to build
 
 ALL_APPS = $(UTILS_APPLIST) $(UCSC_APPS)
 
 # all: builds all utilities here
 
 all: $(ALL_APPS:%=%.all)
 
 %.all:
 	cd $* && echo $* && $(MAKE)
 
 # userAppsB: builds the user application specific programs
 # it would have been nice to be able to use the target name 'userApps'