cb1d427e7dd4718f8b8bfe295193825057d38b07 lrnassar Thu May 30 14:20:18 2019 -0700 Turning on GenBank updates for new assembly #22425 diff --git src/hg/makeDb/genbank/etc/hgwdev.dbs src/hg/makeDb/genbank/etc/hgwdev.dbs index 2f4f251..a5f2fc2 100644 --- src/hg/makeDb/genbank/etc/hgwdev.dbs +++ src/hg/makeDb/genbank/etc/hgwdev.dbs @@ -1,260 +1,260 @@ ## # genome databases to update on hgwdev # list has urgent databases at front, then the latest assembly for each org, # then all the other assemblies for org. Please keep this ordering! # # urgent databases hg38 hg19 mm10 # # Most recent assembly for each org # ailMel1 allMis1 ambMex1 ancCey1 anoCar2 anoGam3 aotNan1 apiMel2 aplCal1 aptMan1 aquChr2 ascSuu1 balAcu1 bisBis1 -bosTau8 bosTau9 braFlo2 caeJap1 caePb2 caeRem3 calJac3 calMil1 canFam3 casCan1 cavApe1 cavPor3 cb3 ce11 cebCap1 cerAty1 cerSim1 chiLan1 chlSab2 choHof1 chrPic1 chrPic2 ci3 colAng1 cotJap2 criGri1 criGriChoV2 danRer10 danRer11 dasNov3 dipOrd2 dm3 dm6 dp3 droAna2 droEre1 droGri1 droMoj2 droPer1 droSec1 droSim1 droVir2 droYak2 echTel2 equCab3 eriEur2 eulFla1 eulMac1 felCat9 ficAlb1 fr3 fukDam1 gadMor1 galGal6 galVar1 gasAcu1 geoFor1 gorGor5 hetGla2 latCha1 loxAfr3 macEug2 macFas5 macNem1 manLeu1 manPen1 melGal5 melUnd1 micMur3 micOch1 monDom5 musFur1 myoLuc2 nanPar1 nasLar1 neoSch1 nemVec1 nomLeu3 ochPri3 orcOrc1 oreNil3 ornAna2 oryCun2 oryLat2 otoGar3 oviAri4 oxyTri2 panPan2 panTro6 papAnu4 papHam1 petMar3 poeRet1 ponAbe3 priPac3 proCap1 proCoq1 pteVam1 rheMac8 rn5 rn6 rouAeg1 sacCer3 saiBol1 sarHar1 sorAra2 speTri2 staAur2 strPur4 susScr11 taeGut2 tarSyr2 tetNig2 thaSir1 triMan1 tupBel1 tupChi1 turTru2 vicPac2 xenLae2 xenTro9 # # this is the beginning of the list of secondary assemblies # anoCar1 anoGam1 apiMel1 +bosTau8 bosTau7 bosTau6 bosTau4 bosTau3 bosTau2 braFlo1 caePb1 caeRem2 calJac1 canFam2 canFam1 cb1 ce10 ce6 ce4 ce2 ci1 ci2 criGriChoV1 danRer7 danRer6 danRer5 danRer4 danRer3 dasNov1 dipOrd1 dm2 dm1 dp2 droAna1 droMoj1 droVir1 droYak1 echTel1 equCab2 equCab1 eriEur1 felCat8 felCat5 felCat4 felCat3 fr2 fr1 galGal5 galGal4 galGal3 galGal2 gorGor4 gorGor3 hetGla1 hg18 hg17 hg16 loxAfr1 macEug1 melGal1 micMur1 micMur2 GRCm38B mm9 mm8 mm7 monDom4 monDom1 nomLeu2 nomLeu1 oreNil2 ornAna1 ochPri2 oryCun1 oryLat1 oviAri3 oviAri1 panPan1 panTro5 panTro4 panTro3 panTro2 panTro1 papAnu3 papAnu2 petMar2 petMar1 ponAbe2 priPac1 rheMac3 rheMac2 rhiBie1 rhiRox1 rn4 rn3 sacCer2 sacCer1 sorAra1 staAur1 strPur2 strPur1 susScr3 susScr2 taeGut1 tarSyr1 tetNig1 vicPac1 xenTro7 xenTro3 xenTro2 xenTro1