cfbb26ac44e486b02c92c76f4343edd44a12540c
braney
  Wed Jun 26 09:56:24 2019 -0700
add an upstream gene table for hg38

diff --git src/hg/makeDb/genbank/etc/genbank.conf src/hg/makeDb/genbank/etc/genbank.conf
index d90f1a2..3b35d5f 100644
--- src/hg/makeDb/genbank/etc/genbank.conf
+++ src/hg/makeDb/genbank/etc/genbank.conf
@@ -296,31 +296,31 @@
 hg38.refseq.mrna.native.pslCDnaFilter  = ${finished.refseq.mrna.native.pslCDnaFilter}
 hg38.refseq.mrna.xeno.pslCDnaFilter    = ${finished.refseq.mrna.xeno.pslCDnaFilter}
 hg38.genbank.mrna.native.pslCDnaFilter = ${finished.genbank.mrna.native.pslCDnaFilter}
 hg38.genbank.mrna.xeno.pslCDnaFilter   = ${finished.genbank.mrna.xeno.pslCDnaFilter}
 hg38.genbank.est.native.pslCDnaFilter = ${finished.genbank.est.native.pslCDnaFilter}
 hg38.genbank.est.xeno.pslCDnaFilter   = ${finished.genbank.est.xeno.pslCDnaFilter}
 hg38.genbank.mrna.xeno.load  = yes
 hg38.genbank.mrna.xeno.loadDesc = yes
 hg38.genbank.est.xeno.load = yes
 hg38.refseq.mrna.xeno.load  = yes
 hg38.refseq.mrna.xeno.loadDesc = yes
 hg38.mgc = yes
 hg38.orfeome = yes
 hg38.downloadDir = hg38
 hg38.ccds.buildId = 20
-# hg38.upstreamGeneTbl = refGene
+hg38.upstreamGeneTbl = refGene
 # hg38.upstreamMaf = multiz46way /hive/data/genomes/hg38/bed/multiz46way/species.list
 hg38.genbank.mrna.blatTargetDb = yes
 hg38.perChromTables = no
 
 # hg19 - GRCh37 - Genome Reference Consortium Human Reference 37
 #       Assembly Accession: GCA_000001405.1
 #hg19.serverGenome = /hive/data/genomes/hg19/hg19.2bit
 hg19.serverGenome = /hive/data/genomes/hg19/hg19.initial.2bit
 hg19.ooc = /hive/data/genomes/hg19/11.ooc
 hg19.lift = /hive/data/genomes/hg19/jkStuff/hg19.unBridged.lift
 #hg19.hapRegions = /hive/data/genomes/hg19/jkStuff/hg19.p13.alt.psl
 hg19.hapRegions = /hive/data/genomes/hg19/jkStuff/hg19.haplotypes.psl
 hg19.refseq.mrna.native.pslCDnaFilter  = ${finished.refseq.mrna.native.pslCDnaFilter}
 hg19.refseq.mrna.xeno.pslCDnaFilter    = ${finished.refseq.mrna.xeno.pslCDnaFilter}
 hg19.genbank.mrna.native.pslCDnaFilter = ${finished.genbank.mrna.native.pslCDnaFilter}