++We are pleased to announce the DGV Gold Standard track for human (GRCh19/hg19). This track displays +copy number variants (CNVs), insertions/deletions (InDels), inversions and inversion breakpoints +annotated by the Database of Genomic Variants +(DGV). The initial criteria for the Gold Standard set require that a variant is found in at least +two different studies and found in at least two different samples. After filtering out low-quality +variants, the remaining variants are clustered according to 50% minimum overlap, and then merged +into a single record. Gains and losses are merged separately. +
+ ++The DGV Gold Standard track +utilizes a boxplot-like display to represent the merging of records. The highest ranking variant in +the cluster defines the inner "box", while the outer lines define the outermost start and stop +coordinates of the CNV. In this way, the inner box forms a high-confidence CNV location and the +thin connecting lines indicate confidence intervals for the location of CNV. +
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+We would like to thank Jeff MacDonald and the Database of Genomic Variants +group for providing guidance and these data. We would also like to thank Christopher Lee and Conner +Powell as well as the entire UCSC Genome Browser team for creating and releasing this track. +
+Genome browsers are now available for the Bos taurus assembly released in Apr. 2018 by the USDA Agricultural Research Service (ARS-UCD1.2), and the Papio anubis assembly released in Apr. 2017 by the Human Genome Sequencing Center (Panu_3.0).