8e4bc5dcf3f4280a5ca94dd3e0e22ffc51a83299 brianlee Mon Jun 17 17:09:18 2019 -0700 Changing wording around #padding example based on conversation with Kate in docs. diff --git src/hg/htdocs/goldenPath/help/multiRegionHelp.html src/hg/htdocs/goldenPath/help/multiRegionHelp.html index 1896dc8..95105a7 100755 --- src/hg/htdocs/goldenPath/help/multiRegionHelp.html +++ src/hg/htdocs/goldenPath/help/multiRegionHelp.html @@ -176,31 +176,31 @@ chromosomes side-by-side. <a href="#Example3">Example 3</a> demonstrates the importance of ordering entries within a file.</p> <p> Although all types of BED files are supported, only the information from BED 3 or BED 12 files is relevant to the display. Like BED custom tracks, comments are supported in the BED files used by multi-region mode. Comments are included at the top of the BED file, preceded by "#". The supported comments are:</p> <ul> <li> <strong>#database:</strong> The genome assembly database for which the BED file is intended. If the file is loaded onto a different assembly, the custom regions mode will not work.</li> <li> <strong>#shortDesc:</strong> (Optional) A short description of the custom region, displayed next to the chromosome ideogram.</li> <li> - <strong>#padding:</strong> Sets the size of the padding on either side of a BED entry in the + <strong>#padding:</strong> Sets the size of the padding on either side of a multi-region boundary in the browser tracks window.</li> </ul> <p> Here is an example of a BED3 file with comments:</p> <pre><code>#database hg38 #shortDesc Example of a short description #padding 6 chr1 pos1 pos2 chr2 pos1 pos2 </code></pre> <p> The Genome Browser search mechanism functions differently when using custom BED regions in multi-region view. When searching for a term or position, the browser first searches for the term within the BED-defined regions. If the item is found, the browser display will shift to that location.</p> <p>