85e28d7dd56a748e795fdc5c85a61d8f11fd1613
markd
  Fri Jun 21 10:44:57 2019 -0700
added program to merge adjacent blocks in BED 12 files

diff --git src/hg/utils/makefile src/hg/utils/makefile
index 6127ae9..7f13e4b 100644
--- src/hg/utils/makefile
+++ src/hg/utils/makefile
@@ -10,30 +10,31 @@
 # to check for Mac OSX Darwin specifics:
 UNAME_S := $(shell uname -s)
 
 # can not build this on Mac OSX - has functions not supported
 ifeq ($(UNAME_S),Darwin)
   buildRefresh=
 else
   buildRefresh=refreshNamedSessionCustomTracks
 endif
 
 # List of directories to build for userApps
 UTILS_APPLIST = \
 	bedExtendRanges \
 	bedToPsl \
 	bedWeedOverlapping \
+	bedMergeAdjacent \
 	bigMafToMaf \
 	bigPslToPsl \
 	binFromRange \
 	chromGraphFromBin \
 	chromGraphToBin \
 	crTreeIndexBed \
 	crTreeSearchBed \
 	gapToLift \
 	genePredFilter \
 	genePredToBigGenePred \
 	genePredToProt \
 	gff3ToGenePred \
 	gff3ToPsl \
 	gtfToGenePred \
 	hgvsToVcf \
@@ -72,30 +73,31 @@
 	buildReleaseLog \
 	checkUrlsInTable \
 	geoMirrorNode \
 	makeTrackIndex \
 	mysqlSecurityCheck \
 	pslFixCdsJoinGap \
 	pslMismatchGapToBed \
 	pslUniq \
 	refSeqGet \
 	safePush \
 	toDev64 \
 	vcfToHgvs \
 	wigBedToStep
 
 TEST_DIRS = \
+	bedMergeAdjacent \
 	genePredFilter \
 	genePredToProt \
 	gff3ToGenePred \
 	gff3ToPsl \
 	gtfToGenePred \
 	hgvsToVcf \
 	hubCheck \
 	overlapSelect \
 	pslMap \
 	pslRc \
 	pslToBigPsl \
 	refSeqGet \
 	transMapPslToGenePred \
 	vcfToHgvs