d2da1341d245cf5a5d574e2f75375ef49091ad30 chmalee Tue Jul 16 13:18:35 2019 -0700 Rework of omim otto pipeline to accomadate new genemap schema, no refs diff --git src/hg/lib/omimGeneMap2.as src/hg/lib/omimGeneMap2.as new file mode 100644 index 0000000..b09de43 --- /dev/null +++ src/hg/lib/omimGeneMap2.as @@ -0,0 +1,15 @@ +table omimGeneMap2 +"This table contains the same data as the genemap2.txt file downloaded from OMIM" + ( + string location; "Cyto Location" + string compCtyoLoc; "Computed Cyto Location" + int omimId; "Mim Number" + string geneSymbol; "Gene Symbol(s)" + lstring geneName; "Gene Name" + string approvedSymbol; "Approved Symbol" + string entrez; "Entrez Gene ID" + string ensGeneId; "Ensembl Gene ID" + lstring comments; "Comments" + lstring phenotypes; "Phenotypes" + lstring mmGeneId; "Mouse Gene Symbol/ID" + )