438d43910f377e7abe8b81cb9b04acaadaca1b6d
markd
  Thu Jul 18 13:04:33 2019 -0700
indicated that GENCODE gene/transcript status columns are obsolete

diff --git src/hg/inc/encode/wgEncodeGencodeAttrs.h src/hg/inc/encode/wgEncodeGencodeAttrs.h
index 741a2bb..6c5f4bb 100644
--- src/hg/inc/encode/wgEncodeGencodeAttrs.h
+++ src/hg/inc/encode/wgEncodeGencodeAttrs.h
@@ -1,77 +1,77 @@
 /* wgEncodeGencodeAttrs.h was originally generated by the autoSql program, which also 
  * generated wgEncodeGencodeAttrs.c and wgEncodeGencodeAttrs.sql.  This header links the database and
  * the RAM representation of objects. */
 
 #ifndef WGENCODEGENCODEATTRS_H
 #define WGENCODEGENCODEATTRS_H
 
 #define WGENCODEGENCODEATTRS_NUM_COLS 14
 #define WGENCODEGENCODEATTRS_NO_PROTEIN_ID_NUM_COLS 13  // older tables
 
 extern char *wgEncodeGencodeAttrsCommaSepFieldNames;
 
 struct wgEncodeGencodeAttrs
 /* Basic set of attributes associated with all Gencode transcripts. */
     {
     struct wgEncodeGencodeAttrs *next;  /* Next in singly linked list. */
     char *geneId;	/* Gene identifier */
     char *geneName;	/* Gene name */
     char *geneType;	/* BioType of gene */
-    char *geneStatus;	/* Status of gene */
+    char *geneStatus;	/* Status of gene (obsolete) */
     char *transcriptId;	/* Transcript identifier */
     char *transcriptName;	/* Transcript name */
     char *transcriptType;	/* BioType of transcript */
-    char *transcriptStatus;	/* Status of transcript */
+    char *transcriptStatus;	/* Status of transcript (obsolete) */
     char *havanaGeneId;	/* HAVANA identifier if gene is in HAVANA */
     char *havanaTranscriptId;	/* HAVANA identifier if transcript is in HAVANA */
     char *ccdsId;	/* CCDS identifier if transcript is in CCDS */
     int level;	/* GENCODE level: 1 = experimental confirmed, 2 = manual, 3 = automated */
     char *transcriptClass;	/* high level type of transcript */
     char *proteinId;	/* Protein identifier (not loaded on many older versions of GENCODE) */
     };
 
 void wgEncodeGencodeAttrsStaticLoad(char **row, int numColumns, struct wgEncodeGencodeAttrs *ret);
 /* Load a row from wgEncodeGencodeAttrs table into ret.  The contents of ret will
  * be replaced at the next call to this function. */
 
 struct wgEncodeGencodeAttrs *wgEncodeGencodeAttrsLoad(char **row, int numColumns);
 /* Load a wgEncodeGencodeAttrs from row fetched with select * from wgEncodeGencodeAttrs
  * from database.  Dispose of this with wgEncodeGencodeAttrsFree(). */
 
 struct wgEncodeGencodeAttrs *wgEncodeGencodeAttrsLoadAll(char *fileName);
 /* Load all wgEncodeGencodeAttrs from whitespace-separated file.
  * Dispose of this with wgEncodeGencodeAttrsFreeList(). */
 
 struct wgEncodeGencodeAttrs *wgEncodeGencodeAttrsLoadAllByChar(char *fileName, char chopper);
 /* Load all wgEncodeGencodeAttrs from chopper separated file.
  * Dispose of this with wgEncodeGencodeAttrsFreeList(). */
 
 #define wgEncodeGencodeAttrsLoadAllByTab(a) wgEncodeGencodeAttrsLoadAllByChar(a, '\t');
 /* Load all wgEncodeGencodeAttrs from tab separated file.
  * Dispose of this with wgEncodeGencodeAttrsFreeList(). */
 
 struct wgEncodeGencodeAttrs *wgEncodeGencodeAttrsCommaIn(char **pS, struct wgEncodeGencodeAttrs *ret);
 /* Create a wgEncodeGencodeAttrs out of a comma separated string. 
  * This will fill in ret if non-null, otherwise will
  * return a new wgEncodeGencodeAttrs */
 
 void wgEncodeGencodeAttrsFree(struct wgEncodeGencodeAttrs **pEl);
 /* Free a single dynamically allocated wgEncodeGencodeAttrs such as created
  * with wgEncodeGencodeAttrsLoad(). */
 
 void wgEncodeGencodeAttrsFreeList(struct wgEncodeGencodeAttrs **pList);
 /* Free a list of dynamically allocated wgEncodeGencodeAttrs's */
 
 void wgEncodeGencodeAttrsOutput(struct wgEncodeGencodeAttrs *el, FILE *f, char sep, char lastSep);
 /* Print out wgEncodeGencodeAttrs.  Separate fields with sep. Follow last field with lastSep. */
 
 #define wgEncodeGencodeAttrsTabOut(el,f) wgEncodeGencodeAttrsOutput(el,f,'\t','\n');
 /* Print out wgEncodeGencodeAttrs as a line in a tab-separated file. */
 
 #define wgEncodeGencodeAttrsCommaOut(el,f) wgEncodeGencodeAttrsOutput(el,f,',',',');
 /* Print out wgEncodeGencodeAttrs as a comma separated list including final comma. */
 
 /* -------------------------------- End autoSql Generated Code -------------------------------- */
 
 #endif /* WGENCODEGENCODEATTRS_H */