0c04b1cdeb2453a69da42683252e4285d0838362
lrnassar
  Thu Jul 4 11:38:28 2019 -0700
Expanding transMap data access section #23629

diff --git src/hg/makeDb/trackDb/transMapTailer.html src/hg/makeDb/trackDb/transMapTailer.html
index 5ddcb79..ca53275 100644
--- src/hg/makeDb/trackDb/transMapTailer.html
+++ src/hg/makeDb/trackDb/transMapTailer.html
@@ -66,31 +66,34 @@
 location and is given the identifier <tt>BC149621.1-1.1</tt>.  However, <tt>BC149621.1-2</tt>
 maps to two locations, resulting in <tt>BC149621.1-2.1</tt> and <tt>BC149621.1-2.2</tt>.  Note
 that multiple TransMap mappings are usually the result of tandem duplications, where both
 chains are identified as syntenic.
 </P>
 
 <h2>Data Access</h2>
 
 <p>
 The raw data for these tracks can be accessed interactively through the
 <a href="hgTables">Table Browser</a> or the
 <a href="hgIntegrator">Data Integrator</a>.
 For automated analysis, the annotations are stored in
 <a href="../goldenPath/help/bigPsl.html">bigPsl</a> files (containing a
 number of extra columns) and can be downloaded from our
-<a href="http://hgdownload.soe.ucsc.edu/gbdb/$db/transMap/">download server</a>.
+<a href="http://hgdownload.soe.ucsc.edu/gbdb/$db/transMap/">download server</a>, 
+or queried using our <a href="../goldenPath/help/api.html">API</a>. For more 
+information on accessing track data see our 
+<a href="../FAQ/FAQdownloads.html#download36">Track Data Access FAQ</a>.
 The files are associated with these tracks in the following way:
 <ul>
 <li>TransMap Ensembl - <tt>$db.ensembl.transMapV??.bigPsl</tt></li>
 <li>TransMap RefGene - <tt>$db.refseq.transMapV??.bigPsl</tt></li>
 <li>TransMap RNA - <tt>$db.rna.transMapV??.bigPsl</tt></li>
 <li>TransMap ESTs - <tt>$db.est.transMapV??.bigPsl</tt></li>
 </ul>
 Individual regions or the whole genome annotation can be obtained using our tool
 <tt>bigBedToBed</tt> which can be compiled from the source code or downloaded as
 a precompiled binary for your system. Instructions for downloading source code and
 binaries can be found
 <a href="http://hgdownload.soe.ucsc.edu/downloads.html#utilities_downloads">here</a>.
 The tool can also be used to obtain only features within a given range, for example:
 <p><tt>
 bigBedToBed http://hgdownload.soe.ucsc.edu/gbdb/$db/transMap/V4/$db.refseq.transMapV4.bigPsl