9bd775a156a382caf90b876924c333e656c4de4c lrnassar Thu Jul 4 14:26:04 2019 -0700 Fixing little typo #23629 diff --git src/hg/makeDb/trackDb/transMapTailer.html src/hg/makeDb/trackDb/transMapTailer.html index ca53275..9298dd3 100644 --- src/hg/makeDb/trackDb/transMapTailer.html +++ src/hg/makeDb/trackDb/transMapTailer.html @@ -21,31 +21,31 @@
  • Source transcript alignments were obtained from vertebrate organisms in the UCSC Genome Browser Database. BLAT alignments of RefSeq Genes, GenBank mRNAs, and GenBank Spliced ESTs to the cognate genome, along with UCSC Genes, were used as available.
  • For all vertebrate assemblies that had BLASTZ alignment chains and nets to the $organism ($db) genome, a subset of the alignment chains were selected as follows:
  • The pslMap program was used to do a base-level projection of the source transcript alignments via the selected chains to the $organism genome, resulting in pairwise alignments of the source transcripts to the genome.
  • The resulting alignments were filtered with pslCDnaFilter with a global near-best criteria of 0.5% in finished genomes (human and mouse) and 1.0% in other genomes. Alignments where less than 20% of the transcript mapped were discarded.

    To ensure unique identifiers for each alignment, cDNA and gene accessions were