bde35bf9d06a82fa4d60fcf3259f43259a93b0c5 ccpowell Tue Jul 9 16:11:04 2019 -0700 Swapping MySQL to MariaDB in docs, refs #23597 diff --git src/hg/htdocs/ENCODE/FAQ/index.html src/hg/htdocs/ENCODE/FAQ/index.html index fccab97..0c3b633 100755 --- src/hg/htdocs/ENCODE/FAQ/index.html +++ src/hg/htdocs/ENCODE/FAQ/index.html @@ -287,31 +287,31 @@ <div class="bar"><h4 class="title">ENCODE METADATA AND FILENAMES</h4></div> <div class="content"> <p> <b><font color="#006666">Question: </font></b><br> How do I extract information about an ENCODE experiment from the filename? <p> <b><font color="#006666">Response:</font></b><br> This is not recommended. While ENCODE filenames have some metadata embedded, the information there is not complete nor easily extracted. Rather, use the file's metadata, for example in "files.txt", or access metadata in the following places: <ol>By opening "files.txt" - the metadata file located in each track's corresponding download directory. <br/>By clicking the blue down-arrow next to each subtrack listed on a track's Track Settings page. <br/>By using <a href="/ENCODE/search.html" target="_blank">Track Search or File Search</a> to filter files by metadata. <br/>By using the <a href="../../cgi-bin/hgTables" target="_blank">Table Browser tool</a> and setting "Group" to "All Tables" and selecting the "metaDb" table. Click the "describe table schema" button to learn more about the metaDb table. - <br/>By using the <a href="../../goldenPath/help/mysql.html" target="_blank">public MySQL database</a> + <br/>By using the <a href="../../goldenPath/help/mysql.html" target="_blank">public MariaDB database</a> to query the metaDb table for each database. </ol> The metadata uses controlled vocabulary (cv.ra), which can be downloaded as a text file <a href="http://hgdownload.soe.ucsc.edu/goldenPath/encodeDCC/cv.ra" target="_blank">here</a>. </div><!--end content--> </div><!--end wrapper--> <!--Content Tables-------------------------------------------------------> <a name="release7"></a> <!--outer table is for border purposes--> <div class="wrapper"> <td align="right"><a href="#FAQ"><img src="../../images/top.gif" alt="" align="right" border="0"></a> <div class="bar"><h4 class="title">ENCODE FILE FORMATS</h4></div> <div class="content"> <p>